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View Structure Prediction Details

Protein: DUT_PHOLL
Organism: Photorhabdus luminescens subsp. laumondii
Length: 152 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DUT_PHOLL.

Description E-value Query
Range
Subject
Range
gi|77958458 - gi|77958458|ref|ZP_00822491.1| COG0756: dUTPase [Yersinia bercovieri ATCC 43970]
211.0 [0..1] [152..1]

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Predicted Domain #1
Region A:
Residues: [1-152]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKKIDVKIL DPRIGEEFPL PTYATPGSAG LDLRACLDNA VELAPGQTEL LPTGLAIHIG  60
   61 DEQLAAVILP RSGLGHKHGV VLGNLVGLID SDYQGQLMVS VWNRGDKAFT IQPGERIAQI 120
  121 VFVPVVQAEF NLVEDFETSE RGSGGFGHSG RQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.0
Match: 1dudA
Description: DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDE HYDROLASE (D-UTPASE) COMPLEXED WITH THE SUBSTRATE ANALOGUE DEOXYURIDINE 5'-DIPHOSPHATE (D-UDP)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nucleoside-triphosphate diphosphatase activity 5.64898078077484 bayes_pls_golite062009
dUTP diphosphatase activity 5.62861923551608 bayes_pls_golite062009
hydrolase activity 1.8120510491809 bayes_pls_golite062009
catalytic activity 1.71668532866244 bayes_pls_golite062009
binding 1.05588720719142 bayes_pls_golite062009
peroxisome proliferator activated receptor binding 1.01014631701573 bayes_pls_golite062009
pyrimidine deoxyribonucleotide binding 0.378438138772693 bayes_pls_golite062009
pyrimidine nucleotide binding 0.26077271033521 bayes_pls_golite062009
nucleotide binding 0.0227161300506727 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle