YRC Public Data Repository - Protein Structure Prediction

Protein:	DIPD_PROTE
Organism:	Protophormia terraenovae
Length:	101 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DIPD_PROTE.

Description	E-value	Query Range	Subject Range
gi\|6015598 - gi\|6015598\|emb\|CAB57822.1\| diptericin [Protophormia terraenovae]	142.0	[0..1]	[101..1]
gi\|125808238, gi... - gi\|54635852\|gb\|EAL25255.1\| GA11797 [Drosophila pseudoobscura pseudoobscura], gi\|125808238\|ref\|XP_001... gi\|54635852\|gb\|E... - GA11797-PA [Drosophila pseudoobscura], GA11797 [Drosophila pseudoobscura pseudoobscura]	130.0	[0..6]	[100..7]
gi\|25012940 - gi\|25012940\|gb\|AAN71556.1\| RH29451p [Drosophila melanogaster]	125.0	[0..3]	[100..17]
gi\|33328981 - gi\|33328981\|gb\|AAQ09897.1\| CG10794 [Drosophila yakuba]	121.0	[0..3]	[100..7]

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Predicted Domain #1

Region A:
Residues: [1-101]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLFYLLVIC ALSLAVMADE KPKLILPTPA PPNLPQLVGG GGGNRKDGFG VSVDAHQKVW  60
   61 TSDNGRHSIG VTPGYSQHLG GPYGNSRPDY RIGAGYSYNF G

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	29.29243
Match:	PF03769.6
Description:	No description for PF03769.6 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits