YRC Public Data Repository - Protein Structure Prediction

Protein:	DICB_ECOLI
Organism:	Escherichia coli
Length:	62 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DICB_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|254793191, gi... - gi\|254793191\|ref\|YP_003078028.1\| putative inhibitor of cell division encoded by cryptic prophage CP-... gi\|15801486, gi\|... - gi\|15801990\|ref\|NP_288011.1\| putative inhibitor of cell division encoded by cryptic prophage CP-933P... gi\|25500197 - pir\|\|G85706 hypothetical protein Z2039 [imported] - Escherichia coli (strain O157:H7, substrain EDL...	124.0	[0..1]	[62..36]
gi\|218558190, gi... - gi\|218558190\|ref\|YP_002391103.1\| putative regulator of cell division encoded by prophage [Escherichi... gi\|91072060, gi\|... - gi\|91210486\|ref\|YP_540472.1\| putative regulator of cell division encoded by prophage CP-933O [Escher...	123.0	[0..1]	[62..36]
gi\|26247274, gi\|... - gi\|26247274\|ref\|NP_753314.1\| division inhibition protein dicB [Escherichia coli CFT073], gi\|26107675...	121.0	[0..1]	[62..36]
gi\|226094 - gi\|226094\|prf\|\|1410309A dicB gene	120.0	[0..1]	[62..49]
gi\|25300109, gi\|... - pir\|\|D90914 inhibitor of cell division [imported] - Escherichia coli (strain O157:H7, substrain RIM... gi\|15831538, gi\|... - gi\|15831538\|ref\|NP_310311.1\| inhibitor of cell division [Escherichia coli O157:H7 str. Sakai], gi\|15... gi\|15831538, gi\|... - gi\|15831538\|ref\|NP_310311.1\| inhibitor of cell division [Escherichia coli O157:H7], gi\|15831015\|ref\|... gi\|208816894, gi... - gi\|208816894\|ref\|ZP_03258014.1\| division inhibition protein DicB [Escherichia coli O157:H7 str. EC40... gi\|208810281, gi... - gi\|208810281\|ref\|ZP_03252157.1\| division inhibition protein DicB [Escherichia coli O157:H7 str. EC42... gi\|195939147, gi... - gi\|195939147\|ref\|ZP_03084529.1\| inhibitor of cell division [Escherichia coli O157:H7 str. EC4024], g... gi\|192956640, gi... - gi\|193070043\|ref\|ZP_03050990.1\| division inhibition protein DicB [Escherichia coli E110019], gi\|1929... gi\|217318626, gi... - gi\|217328199\|ref\|ZP_03444281.1\| DicB protein [Escherichia coli O157:H7 str. TW14588], gi\|217318626\|g... gi\|215264568, gi... - gi\|215486496\|ref\|YP_002328927.1\| predicted cell division inhibition protein DicB [Escherichia coli O... gi\|209399736, gi... - gi\|209399736\|ref\|YP_002270191.1\| DicB protein [Escherichia coli O157:H7 str. EC4115], gi\|209397214\|r... gi\|208819027, gi... - gi\|208819027\|ref\|ZP_03259347.1\| division inhibition protein DicB [Escherichia coli O157:H7 str. EC40... gi\|189364867, gi... - gi\|189364867\|gb\|EDU83283.1\| division inhibition protein DicB [Escherichia coli O157:H7 str. EC4501],... gi\|193066306, gi... - gi\|193066306\|ref\|ZP_03047357.1\| division inhibition protein DicB [Escherichia coli E22], gi\|19292607... gi\|189370020, gi... - gi\|189405460\|ref\|ZP_03007819.1\| division inhibition protein DicB [Escherichia coli O157:H7 str. EC86... gi\|189010785, gi... - gi\|189010785\|ref\|ZP_03006454.1\| division inhibition protein DicB [Escherichia coli O157:H7 str. EC40... gi\|168800826, gi... - gi\|189376908\|gb\|EDU95324.1\| division inhibition protein DicB [Escherichia coli O157:H7 str. EC508], ...	117.0	[0..1]	[62..1]

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Predicted Domain #1

Region A:
Residues: [1-62]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLLPNVNT SEGCFEIGVT ISNPVFTEDA INKRKQEREL LNKICIVSML ARLRLMPKGC  60
   61 AQ

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	50.853872
Match:	PF05358.2
Description:	No description for PF05358.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.662	N/A	N/A	a.8.1	Bacterial immunoglobulin/albumin-binding domains
View	Download	0.530	N/A	N/A	a.5.10	Description not found.
View	Download	0.480	N/A	N/A	a.8.1	Bacterial immunoglobulin/albumin-binding domains
View	Download	0.464	N/A	N/A	a.23.5	Hemolysin expression modulating protein HHA
View	Download	0.464	N/A	N/A	a.23.5	Hemolysin expression modulating protein HHA
View	Download	0.444	N/A	N/A	a.4.5	"Winged helix" DNA-binding domain
View	Download	0.444	N/A	N/A	a.4.5	"Winged helix" DNA-binding domain
View	Download	0.435	N/A	N/A	a.5.2	UBA-like
View	Download	0.435	N/A	N/A	a.5.2	UBA-like
View	Download	0.433	N/A	N/A	a.4.5	"Winged helix" DNA-binding domain
View	Download	0.358	N/A	N/A	a.8.5	Description not found.
View	Download	0.331	N/A	N/A	a.4.1	Homeodomain-like
View	Download	0.294	N/A	N/A	a.4.1	Homeodomain-like
View	Download	0.284	N/A	N/A	a.4.1	Homeodomain-like
View	Download	0.238	N/A	N/A	a.4.5	"Winged helix" DNA-binding domain

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits