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View Structure Prediction Details

Protein: DHSD_MOUSE
Organism: Mus musculus
Length: 159 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DHSD_MOUSE.

Description E-value Query
Range
Subject
Range
DHSD_RAT - Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial OS=Rattus norvegicus ...
225.0 [0..1] [159..1]
gi|74268015 - gi|74268015|gb|AAI02258.1| SDHD protein [Bos taurus]
221.0 [0..1] [159..1]
gi|47682403 - gi|47682403|gb|AAH70307.1| Succinate dehydrogenase complex, subunit D, integral membrane protein [Ho...
217.0 [0..1] [159..1]
gi|58294184 - gi|58294184|gb|AAW70032.1| succinate dehydrogenase complex subunit D [Ovis aries]
211.0 [0..4] [159..3]

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Predicted Domain #1
Region A:
Residues: [1-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVLLKLGVL CSGQGARALL LRSRVVRPAY VSAFLQDQPT QGRCGTQHIH LSPSHHSGSK  60
   61 AASLHWTSER VVSVLLLGLI PAGYLNPCSV VDYSLAAALT LHSHWGLGQV VTDYVHGDTL 120
  121 PKAARAGLLA LSALTFAGLC YFNYHDVGIC RAVAMLWKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.0
Match: 1zoyD
Description: Crystal Structure of Mitochondrial Respiratory Complex II from porcine heart at 2.4 Angstroms
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle