YRC Public Data Repository - Protein Structure Prediction

Protein:	DHR15_WHEAT
Organism:	Triticum aestivum
Length:	149 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DHR15_WHEAT.

Description	E-value	Query Range	Subject Range
gi\|6017932 - gi\|6017932\|gb\|AAF01691.1\|AF181453_1 dehydrin; DHN3 [Hordeum vulgare]	98.0	[0..6]	[149..2]
gi\|1181296, gi\|1... - gi\|1589702\|prf\|\|2211422C dehydrin, gi\|1181296\|emb\|CAA55194.1\| dehydrin [Triticum turgidum subsp. dur...	98.0	[0..1]	[149..1]
gi\|18960 - gi\|18960\|emb\|CAA33360.1\| dehydrin [Hordeum vulgare subsp. vulgare] DHN3_HORVU - Dehydrin DHN3 OS=Hordeum vulgare GN=DHN3 PE=2 SV=1	93.0	[0..6]	[149..2]
gi\|38343924 - gi\|38343924\|emb\|CAE54590.1\| dehydrin/response ABA [Fagus sylvatica]	87.0	[0..5]	[148..36]
gi\|17980974 - gi\|17980974\|gb\|AAL50791.1\|AF453444_1 dehydrin WZY1-1 [Triticum aestivum]	87.0	[0..6]	[149..2]
gi\|19032422 - gi\|19032422\|gb\|AAL83427.1\|AF345989_1 48 kDa dehydrin-like protein [Cornus sericea]	86.0	[0..4]	[148..284]
gi\|2970213 - gi\|2970213\|gb\|AAC05922.1\| dehydrin-/LEA group 2-like protein [Lophopyrum elongatum]	85.0	[0..1]	[149..1]

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Predicted Domain #1

Region A:
Residues: [1-149]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFQGQHDNP ANRVDEYGNP FPLAGAWGER TRSRHRRAVP GPQGRAQDRW ILHRSGSSSS  60
   61 SSSSEDDGMG GRRKKGMKEK IKEKLPGGHK DNQQHMATGT GTGGAYGPGT GTGGAYGQQG 120
  121 HTGMAGAGTG TGEKKGIMDK IKEKLPGQH

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	57.585027
Match:	PF00257.10
Description:	No description for PF00257.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits