YRC Public Data Repository - Protein Structure Prediction

Protein:	DAD1_PEA
Organism:	Pisum sativum
Length:	117 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAD1_PEA.

Description	E-value	Query Range	Subject Range
gi\|92898955 - gi\|92898955\|gb\|ABE94463.1\| Defender against death DAD protein [Medicago truncatula]	174.0	[0..4]	[117..2]
gi\|25313138 - gi\|25313138\|pir\|\|F84769 defender against cell death protein [imported] - Arabidopsis thaliana	169.0	[0..4]	[117..47]
gi\|29423681 - gi\|29423681\|gb\|AAO73434.1\| DAD1 [Petunia x hybrida]	167.0	[0..1]	[117..1]
gi\|106879663 - gi\|106879663\|emb\|CAJ42302.1\| defender against apoptotic death 1 [Plantago major]	167.0	[0..6]	[117..5]
PGSC0003DMP400026038 - PGSC0003DMT400038343 DAD1_SOLLC - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Solanum lycopersicum ...	164.0	[0..1]	[117..1]
DAD1_PICMA - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Picea mariana GN=DAD1...	164.0	[0..6]	[117..4]
gi\|13548685 - gi\|13548685\|dbj\|BAB40808.1\| homolog of defender against apoptotic death 1 homolog [Nicotiana suaveol...	164.0	[0..1]	[117..1]

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Predicted Domain #1

Region A:
Residues: [1-117]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTSSTTKD AQDLFHAIWS AYSATPTNLK IIDLYVVFAV FTALLQDVYM ALVGPFPFNS  60
   61 FLSGVLSCVG TAVLAVCLRI QVNKENKEFK DLGPERAFAD FVLCNLVLHL VIMNFLG

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	69.552842
Match:	PF02109.7
Description:	No description for PF02109.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.986	N/A	N/A	a.24.9	alpha-catenin/vinculin

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits