YRC Public Data Repository - Protein Structure Prediction

Protein:	DAD1_CITUN
Organism:	Citrus unshiu
Length:	115 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAD1_CITUN.

Description	E-value	Query Range	Subject Range
gi\|92898955 - gi\|92898955\|gb\|ABE94463.1\| Defender against death DAD protein [Medicago truncatula]	167.0	[0..1]	[115..1]
DAD1_PEA - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Pisum sativum GN=DAD1...	164.0	[0..2]	[115..4]
gi\|25313138 - gi\|25313138\|pir\|\|F84769 defender against cell death protein [imported] - Arabidopsis thaliana	164.0	[0..1]	[115..46]
gi\|106879663 - gi\|106879663\|emb\|CAJ42302.1\| defender against apoptotic death 1 [Plantago major]	164.0	[0..1]	[115..2]
gi\|29423681 - gi\|29423681\|gb\|AAO73434.1\| DAD1 [Petunia x hybrida]	160.0	[0..3]	[115..4]
DAD1_BETPN - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Betula pendula GN=DAD...	160.0	[0..1]	[115..1]
DAD1_PICMA - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Picea mariana GN=DAD1...	160.0	[0..1]	[115..1]
gi\|4126407 - gi\|4126407\|dbj\|BAA36556.1\| homolog to defender against apoptotic death 1 [Citrus unshiu]	160.0	[0..2]	[115..1]

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Predicted Domain #1

Region A:
Residues: [1-115]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARSTGKDAQ ALFHSLRSAY AATPTTLKII DLYVGFAVFT ALIQVVYMAI VGSFPFNSFL  60
   61 SGVLSCVGTA VLAVCLRIQV NKDNKEFKDL PPERAFADFV LCNLVLHLVI MNFLG

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	69.259637
Match:	PF02109.7
Description:	No description for PF02109.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.987	N/A	N/A	a.216.1	Description not found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits