YRC Public Data Repository - Protein Structure Prediction

Protein:	CYSQ_ECOLI
Organism:	Escherichia coli
Length:	246 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYSQ_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|119766926, gi... - gi\|68547392\|ref\|ZP_00586929.1\| Inositol-1(or 4)-monophosphatase [Shewanella amazonensis SB2B], gi\|68...	270.0	[0..1]	[239..4]
gi\|78688379, gi\|... - gi\|78688379\|ref\|ZP_00853076.1\| Inositol-1(or 4)-monophosphatase [Shewanella sp. ANA-3], gi\|78503883\|... gi\|113884757, gi... - gi\|82496763\|ref\|ZP_00882327.1\| Inositol-1(or 4)-monophosphatase [Shewanella sp. MR-4], gi\|82405172\|g...	267.0	[0..1]	[239..4]
gi\|113888756, gi... - gi\|78692445\|ref\|ZP_00856968.1\| Inositol-1(or 4)-monophosphatase [Shewanella sp. MR-7], gi\|78508153\|g...	267.0	[0..1]	[239..4]
gi\|52425784, gi\|... - gi\|52425784\|ref\|YP_088921.1\| SuhB protein [Mannheimia succiniciproducens MBEL55E], gi\|52307836\|gb\|AA...	267.0	[0..1]	[243..8]
gi\|145564939, gi... - gi\|77815058\|ref\|ZP_00814301.1\| Inositol-1(or 4)-monophosphatase [Shewanella putrefaciens CN-32], gi\|... gi\|124508941, gi... - gi\|124547819\|ref\|ZP_01706644.1\| inositol monophosphatase [Shewanella putrefaciens 200], gi\|124508941... gi\|120598673, gi... - gi\|120598673\|ref\|YP_963247.1\| inositol-phosphate phosphatase [Shewanella sp. W3-18-1], gi\|120558766\|...	267.0	[0..1]	[239..4]
gi\|160875618, gi... - gi\|160875618\|ref\|YP_001554934.1\| inositol-phosphate phosphatase [Shewanella baltica OS195], gi\|16086... gi\|151365528, gi... - gi\|153000910\|ref\|YP_001366591.1\| inositol-phosphate phosphatase [Shewanella baltica OS185], gi\|15136... gi\|217973133, gi... - gi\|217973133\|ref\|YP_002357884.1\| Inositol-phosphate phosphatase [Shewanella baltica OS223], gi\|21749... gi\|68518682, gi\|... - gi\|68543638\|ref\|ZP_00583336.1\| Inositol-1(or 4)-monophosphatase [Shewanella baltica OS155], gi\|68518...	266.0	[0..1]	[239..4]
SUHB_PASMU - Inositol-1-monophosphatase OS=Pasteurella multocida (strain Pm70) GN=suhB PE=3 SV=1 SUHB_PASMU - Inositol-1-monophosphatase OS=Pasteurella multocida GN=suhB PE=3 SV=1	266.0	[0..1]	[243..4]
gi\|24348211, gi\|... - gi\|24373813\|ref\|NP_717856.1\| extragenic suppressor protein SuhB [Shewanella oneidensis MR-1], gi\|243... SO2260 - extragenic suppressor protein SuhB	265.0	[0..1]	[239..4]
gi\|49612688, gi\|... - gi\|50122162\|ref\|YP_051329.1\| inositol monophosphatase [Pectobacterium atrosepticum SCRI1043], gi\|496...	262.0	[0..1]	[243..4]
gi\|77359290, gi\|... - gi\|77359290\|ref\|YP_338865.1\| inositol-1-monophosphatase [Pseudoalteromonas haloplanktis TAC125], gi\|...	261.0	[0..1]	[238..4]

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Predicted Domain #1

Region A:
Residues: [1-246]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDQVCQLAR NAGDAIMQVY DGTKPMDVVS KADNSPVTAA DIAAHTVIMD GLRTLTPDVP  60
   61 VLSEEDPPGW EVRQHWQRYW LVDPLDGTKE FIKRNGEFTV NIALIDHGKP ILGVVYAPVM 120
  121 NVMYSAAEGK AWKEECGVRK QIQVRDARPP LVVISRSHAD AELKEYLQQL GEHQTTSIGS 180
  181 SLKFCLVAEG QAQLYPRFGP TNIWDTAAGH AVAAAAGAHV HDWQGKPLDY TPRESFLNPG 240
  241 FRVSIY

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	68.39794
Match:	2qflA
Description:	No description for 2qflA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits