| Protein: | CYAA_SALTY |
| Organism: | Salmonella typhimurium |
| Length: | 848 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYAA_SALTY.
| Description | E-value | Query Range |
Subject Range |
|
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1576.0 | [0..1] | [848..1] |
|
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1575.0 | [0..1] | [848..1] |
|
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1575.0 | [0..1] | [848..1] |
|
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1573.0 | [0..1] | [848..1] |
|
|
1573.0 | [0..1] | [848..1] |
|
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1570.0 | [0..1] | [848..1] |
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1570.0 | [0..1] | [848..1] |
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1569.0 | [0..1] | [848..1] |
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1568.0 | [0..1] | [848..1] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MYLYIETLKQ RLDAINQLRV DRALAAMGPA FQQVYSLLPT LLHYHHPLMP GYLDGNVPSG 60
61 ICFYTPDETQ RHYLNELELY RGMTPQDPPK GELPITGVYT MGSTSSVGQS CSSDLDIWVC 120
121 HQSWLDGEER QLLQRKCSLL ESWAASLG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.294 | d.110.2 | GAF domain-like |
| View | Download | 0.255 | d.129.3 | Bet v1-like |
| View | Download | 0.255 | c.23.5 | Flavoproteins |
| View | Download | 0.251 | d.129.3 | Bet v1-like |
| View | Download | 0.250 | c.23.12 | Formate/glycerate dehydrogenase catalytic domain-like |
| View | Download | 0.215 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
|
Region A: Residues: [149-203] |
1 11 21 31 41 51
| | | | | |
1 VEVSFFLIDE NRFRHNESGS LGGEDCGSTQ HILLLDEFYR TAVRLAGKRI LWSMV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.365 | N/A | N/A | g.68.1 | Description not found. |
| View | Download | 0.362 | N/A | N/A | d.47.1 | Ribosomal protein L11, N-terminal domain |
| View | Download | 0.311 | N/A | N/A | d.47.1 | Ribosomal protein L11, N-terminal domain |
| View | Download | 0.310 | N/A | N/A | a.38.2 | Description not found. |
| View | Download | 0.254 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.253 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.233 | N/A | N/A | a.43.1 | Met repressor-like |
| View | Download | 0.222 | N/A | N/A | f.30.1 | Photosystem I reaction center subunit X, PsaK |
|
Region A: Residues: [204-405] |
1 11 21 31 41 51
| | | | | |
1 PCDEEEHYDD YVMTLYAQGV LTPNEWLDLG GLSSLSAEEY FGASLWQLYK SIDSPYKAVL 60
61 KTLLLEAYSW EYPNPRLLAK DIKQRLHDGE IVSFGLDPYC MMLERVTEYL TAIEDPTRLD 120
121 LVRRCFYLKV CEKLSRERAC VGWRREVLSQ LVSEWGWDDA RLTMLDNRAN WKIDQVREAH 180
181 NELLDAMMQS YRNLIRFARR NN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [406-642] |
1 11 21 31 41 51
| | | | | |
1 LSVSASPQDI GVLTRKLYAA FEALPGKVTL VNPQISPDLS EPNLTFIHVP PGRANRSGWY 60
61 LYNRAPNMDS IISHQPLEYN RYLNKLVAWA WFNGLLTSRT HLFIKGNGIV DLPKLQEMVA 120
121 DVSHHFPLRL PAPTPKALYS PCEIRHLAII VNLEYDPTAA FRNKVVHFDF RKLDVFSFGE 180
181 EQNCLIGSID LLYRNSWNEV RTLHFNGEQA MIEALKTILG KMHQDAAPPD SVEVFCY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [643-848] |
1 11 21 31 41 51
| | | | | |
1 SQHLRGLIRT RVQQLVSECI ELRLSSTRQE TGRFKALRVS GQTWGLFFER LNVSVQKLEN 60
61 AIEFYGAISH NKLHGLSVQV ETNQVKLPSV VDGFASEGII QFFFEETGDE KGFNIYILDE 120
121 SNRAEVYHHC EGSKEELVRD VSRFYSSSHD RFTYGSSFIN FNLPQFYQIV KTDGRAQVIP 180
181 FRTQPINTVP PANQDHDAPL LQQYFS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
