YRC Public Data Repository - Protein Structure Prediction

Protein:	CRCB_PYRFU
Organism:	Pyrococcus furiosus
Length:	123 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRCB_PYRFU.

Description	E-value	Query Range	Subject Range
gi\|67545817, gi\|... - gi\|67545817\|ref\|ZP_00423736.1\| Camphor resistance CrcB protein [Burkholderia vietnamiensis G4], gi\|6...	111.0	[0..5]	[121..101]
gi\|89321322, gi\|... - gi\|89337738\|ref\|ZP_01190516.1\| Camphor resistance CrcB protein [Mycobacterium flavescens PYR-GCK], g...	110.0	[0..1]	[123..3]
gi\|88941515, gi\|... - gi\|88941515\|ref\|ZP_01146929.1\| crcB protein [Acidiphilium cryptum JF-5], gi\|88919772\|gb\|EAR38909.1\| ...	110.0	[0..2]	[122..69]
CRCB_PYRHO - Putative fluoride ion transporter CrcB OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JC... CRCB_PYRHO - Protein crcB homolog OS=Pyrococcus horikoshii GN=crcB PE=3 SV=1	110.0	[0..1]	[123..1]
CRCB_OCEIH - Protein crcB homolog OS=Oceanobacillus iheyensis GN=crcB PE=3 SV=1 CRCB_OCEIH - Putative fluoride ion transporter CrcB OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / K...	109.0	[0..3]	[121..1]
gi\|218900224, gi... - gi\|218900224\|ref\|YP_002448635.1\| crcB protein [Bacillus cereus G9842], gi\|218540671\|gb\|ACK93065.1\| c... gi\|75760557, gi\|... - gi\|75760557\|ref\|ZP_00740591.1\| CrcB family protein [Bacillus thuringiensis serovar israelensis ATCC ... gi\|228791497, gi... - gi\|228968194\|ref\|ZP_04129194.1\| Protein crcB 1 [Bacillus thuringiensis serovar sotto str. T04001], g... gi\|228903577, gi... - gi\|228903577\|ref\|ZP_04067698.1\| Protein crcB 1 [Bacillus thuringiensis IBL 4222], gi\|228856006\|gb\|EE...	108.0	[0..6]	[121..13]
CRCB_GEOSL - Protein CrcB homolog OS=Geobacter sulfurreducens GN=crcB PE=3 SV=1 CRCB_GEOSL - Protein CrcB homolog OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=crcB PE=3 ...	106.0	[0..3]	[123..17]
gi\|30692518, gi\|... - gi\|30692518\|gb\|AAP33390.1\| CrcB [Bacillus thuringiensis serovar aizawai], gi\|221665115\|gb\|ACM24761.1...	106.0	[0..4]	[121..29]
gi\|89092931, gi\|... - gi\|89092931\|ref\|ZP_01165883.1\| crcB protein domain protein [Oceanospirillum sp. MED92], gi\|89082956\|...	106.0	[0..3]	[122..1]
CRCB1_BACC1 - Putative fluoride ion transporter CrcB 1 OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=crcB1 P...	105.0	[0..1]	[121..1]

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Predicted Domain #1

Region A:
Residues: [1-123]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLREVALVL IGGGTGAVAR YYLSGVLPVY RSFPVGTLLV NSLASFLLGY LYGLIFWGLD  60
   61 VSRESRLFLG TGFCGGLSTF STFSYETFSL IREGEYLTAL LNIFANVLAT IFLVFLGFVL 120
  121 ARR

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	51.387216
Match:	PF02537.6
Description:	No description for PF02537.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.998	N/A	N/A	a.24.9	alpha-catenin/vinculin

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits