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View Structure Prediction Details

Protein: CLV1_ARATH
Organism: Arabidopsis thaliana
Length: 980 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for CLV1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-608]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS  60
   61 FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT LAANNFTGEL PLEMKSLTSL 120
  121 KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF 180
  181 SGEIPESYGD IQSLEYLGLN GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL 240
  241 TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ 300
  301 LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN 360
  361 GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP IPEELGKCKS LTKIRIVKNL 420
  421 LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP 480
  481 NLQTLFLDRN RFRGNIPREI FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI 540
  541 NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV 600
  601 FNETSFAG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.39794
Match: 2z64A
Description: No description for 2z64A was found.

Predicted Domain #2
Region A:
Residues: [609-827]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTYLCLPHRV SCPTRPGQTS DHNHTALFSP SRIVITVIAA ITGLILISVA IRQMNKKKNQ  60
   61 KSLAWKLTAF QKLDFKSEDV LECLKEENII GKGGAGIVYR GSMPNNVDVA IKRLVGRGTG 120
  121 RSDHGFTAEI QTLGRIRHRH IVRLLGYVAN KDTNLLLYEY MPNGSLGELL HGSKGGHLQW 180
  181 ETRHRVAVEA AKGLCYLHHD CSPLILHRDV KSNNILLDS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.30103
Match: 3cvuA
Description: No description for 3cvuA was found.

Predicted Domain #3
Region A:
Residues: [828-980]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DFEAHVADFG LAKFLVDGAA SECMSSIAGS YGYIAPEYAY TLKVDEKSDV YSFGVVLLEL  60
   61 IAGKKPVGEF GEGVDIVRWV RNTEEEITQP SDAAIVVAIV DPRLTGYPLT SVIHVFKIAM 120
  121 MCVEEEAAAR PTMREVVHML TNPPKSVANL IAF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.0
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle