| Protein: | ci-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1397 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ci-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
884.0 | [0..13] | [826..436] |
|
Region A: Residues: [1-185] |
1 11 21 31 41 51
| | | | | |
1 MDAYALPTYF PLAYSELQFL ASRRAAAVAA AATVLPGSPC INQHHPTDVS SSVTVPSIIP 60
61 TGGTSDSIKT SIQPQICNEN TLLGNAGHQH NHQPQHVHNI NVTGQPHDFH PAYRIPGYME 120
121 QLYSLQRTNS ASSFHDPYVN CASAFHLAGL GLGSADFLGS RGLSSLGELH NAAVAAAAAG 180
181 SLAST
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [186-326] |
1 11 21 31 41 51
| | | | | |
1 DFHFSVDGNR RLGSPRPPGG SIRASISRKR ALSSSPYSDS FDINSMIRFS PNSLATIMNG 60
61 SRGSSAASGS YGHISATALN PMSHVHSTRL QQIQAHLLRA SAGLLNPMTP QQVAASGFSI 120
121 GHMPTSASLR VNDVHPNLSD S
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [327-551] |
1 11 21 31 41 51
| | | | | |
1 HIQITTSPTV TKDVSQVPAA AFSLKNLDDA REKKGPFKDV VPEQPSSTSG GVAQVEADSA 60
61 SSQLSDRCYN NVVNNITGIP GDVKVNSRLD EYINCGSISI PSNEYDCANA DTTDIKDEPG 120
121 DFIETNCHWR SCRIEFITQD ELVKHINNDH IQTNKKAFVC RWEDCTRGEK PFKAQYMLVV 180
181 HMRRHTGEKP HKCTFEGCFK AYSRLENLKT HLRSHTGEKP YTCEY
|
| Detection Method: | |
| Confidence: | 52.69897 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [552-650] |
1 11 21 31 41 51
| | | | | |
1 PGCSKAFSNA SDRAKHQNRT HSNEKPYICK APGCTKRYTD PSSLRKHVKT VHGAEFYANK 60
61 KHKGLPLNDA NSRLQQNNSR HNLQEHNIDS SPCSEDSHL
|
| Detection Method: | |
| Confidence: | 4.66 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [651-770] |
1 11 21 31 41 51
| | | | | |
1 GKMLGTSSPS IKSESDISSS NHHLVNGVRA SDSLLTYSPD DLAENLNLDD GWNCDDDVDV 60
61 ADLPIVLRAM VNIGNGNASA STIGGSVLAR QRFRGRLQTK GINSSTIMLC NIPESNRTFG 120
121
|
| Detection Method: | |
| Confidence: | 20.39794 |
| Match: | 1meyC |
| Description: | Designed zinc finger protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [771-1011] |
1 11 21 31 41 51
| | | | | |
1 ISELNQRITE LKMEPGTDAE IKIPKLPNTT IGGYTEDPLQ NQTSFRNTVS NKQGTVSGSI 60
61 QGQFRRDSQN STASTYYGSM QSRRSSQSSQ VSSIPTMRPN PSCNSTASFY DPISPGCSRR 120
121 SSQMSNGANC NSFTSTSGLP VLNKESNKSL NACINKPNIG VQGVGIYNSS LPPPPSSHLI 180
181 ATNLKRLQRK DSEYHNFTSG RFSVPSYMHS LHIKNNKPVG ENEFDKAIAS NARRQTDPVP 240
241 N
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1012-1094] |
1 11 21 31 41 51
| | | | | |
1 INLDPLTNIS RFSTTPHSFD INVGKTNNIA SSINKDNLRK DLFTVSIKAD MAMTSDQHPN 60
61 ERINLDEVEE LILPDEMLQY LNL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1095-1314] |
1 11 21 31 41 51
| | | | | |
1 VKDDTNHLEK EHQAVPVGSN VSETIASNHY REQSNIYYTN KQILTPPSNV DIQPNTTKFT 60
61 VQDKFAMTAV GGSFSQRELS TLAVPNEHGH AKCESFHHQS QKYMNTDIGS KQQSALPSAH 120
121 QRQTEKSNYN QIIDSSMTSL PELNVDSIYP RNETENIFKV HGDHDNEIQC GIISQSQMSP 180
181 STNLNNDGQF STVNMQPITT SKLFPPEPQK IVCDTQASNT
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1315-1397] |
1 11 21 31 41 51
| | | | | |
1 SVMHLDTYQR TLEYVQSCQN WMETNNTSTN QIQSLPGMPV NNTLFPDVSS STHPYHGTNM 60
61 VINDMTTSLT SLLEENRYLQ MMQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
