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View Structure Prediction Details

Protein: CH16_DROVI
Organism: Drosophila virilis
Length: 139 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CH16_DROVI.

Description E-value Query
Range
Subject
Range
CH16_DROGR - Chorion protein S16 OS=Drosophila grimshawi GN=Cp16 PE=3 SV=1
207.0 [0..1] [139..1]
CH16_DROSU - Chorion protein S16 OS=Drosophila subobscura GN=Cp16 PE=3 SV=1
200.0 [0..1] [138..1]
gi|195491080, gi... - gi|33328989|gb|AAQ09901.1| Cp16 [Drosophila yakuba], gi|195491080|ref|XP_002093409.1| Cp16 [Drosophi...
188.0 [0..1] [138..1]
gi|134305204, gi... - gi|7724|emb|CAA34686.1| chorion protein s16 [Drosophila melanogaster], gi|134305210|gb|ABO71742.1| c...
188.0 [0..1] [138..1]
gi|54641846, gi|... - gi|54641846|gb|EAL30596.1| GA19666-PA [Drosophila pseudoobscura], gi|125978124|ref|XP_001353095.1| G...
184.0 [0..1] [138..1]
gi|66803899, gi|... - gi|66803899|gb|AAY56648.1| chorion protein 16 [Drosophila simulans], gi|134305246|gb|ABO71760.1| cho...
180.0 [0..1] [138..1]
gi|6900011 - gi|6900011|emb|CAB71297.1| chorion protein s16 [Ceratitis capitata]
110.0 [0..8] [118..5]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVNYMRLLC LMACCFSVCL AYRPSGNSYR SGGYGEYIKP VETAEAQAAA LTNAAGAAAS  60
   61 SAKLDGADWY ALNRYGWEQG KPLLVKPYGP LDNLYAAALP PRAFVAEIDP VFKRNSYGGA 120
  121 YGERTVTLNT GSKLAVSAA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 99.853872
Match: PF05836.3
Description: No description for PF05836.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.818 N/A N/A a.24.26 Description not found.
View Download 0.786 N/A N/A a.24.26 Description not found.
View Download 0.775 N/A N/A a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.705 N/A N/A a.24.26 Description not found.
View Download 0.575 N/A N/A a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.575 N/A N/A a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.538 N/A N/A a.25.1 Ferritin-like
View Download 0.534 N/A N/A a.25.1 Ferritin-like
View Download 0.518 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle