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View Structure Prediction Details

Protein: CH15_DROSU
Organism: Drosophila subobscura
Length: 121 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CH15_DROSU.

Description E-value Query
Range
Subject
Range
gi|54641848|gb|E... - GA19658-PA [Drosophila pseudoobscura], GA19658 [Drosophila pseudoobscura pseudoobscura]
gi|54641848, gi|... - gi|54641848|gb|EAL30598.1| GA19658 [Drosophila pseudoobscura pseudoobscura], gi|125978128|ref|XP_001...
112.0 [0..1] [121..1]
Cp15-PA - The gene Chorion protein 15 is referred to in FlyBase by the symbol Dmel\Cp15 (CG6519, FBgn0000355)....
100.0 [0..1] [111..1]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYLFVCVSL ALFAYISANP AYGGNRGGYG GGYGNDRVEY EQILVPSYGR SRGGYGGYDR  60
   61 PQILRSAPSG SRASAAAASA AAAIAPGSYS QYAIPRYEID GSYNGPSHGH GGYGHGGRGG 120
  121 Y

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 51.086186
Match: PF03964.6
Description: No description for PF03964.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle