| Protein: | PTPRC |
| Organism: | Homo sapiens |
| Length: | 1304 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTPRC.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1304] | [3..1306] |
|
|
0.0 | [1..1304] | [1..1304] |
|
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0.0 | [1..1304] | [3..1303] |
|
|
0.0 | [1..1304] | [3..1303] |
|
Region A: Residues: [1-476] |
1 11 21 31 41 51
| | | | | |
1 MYLWLKLLAF GFAFLDTEVF VTGQSPTPSP TGLTTAKMPS VPLSSDPLPT HTTAFSPAST 60
61 FERENDFSET TTSLSPDNTS TQVSPDSLDN ASAFNTTGVS SVQTPHLPTH ADSQTPSAGT 120
121 DTQTFSGSAA NAKLNPTPGS NAISDVPGER STASTFPTDP VSPLTTTLSL AHHSSAALPA 180
181 RTSNTTITAN TSDAYLNASE TTTLSPSGSA VISTTTIATT PSKPTCDEKY ANITVDYLYN 240
241 KETKLFTAKL NVNENVECGN NTCTNNEVHN LTECKNASVS ISHNSCTAPD KTLILDVPPG 300
301 VEKFQLHDCT QVEKADTTIC LKWKNIETFT CDTQNITYRF QCGNMIFDNK EIKLENLEPE 360
361 HEYKCDSEIL YNNHKFTNAS KIIKTDFGSP GEPQIIFCRS EAAHQGVITW NPPQRSFHNF 420
421 TLCYIKETEK DCLNLDKNLI KYDLQNLKPY TKYVLSLHAY IIAKVQRNGS AAMCHF
|
| Detection Method: |  |
| Confidence: | 37.0 |
| Match: | 2v5yA |
| Description: | No description for 2v5yA was found. |
|
Region A: Residues: [477-622] |
1 11 21 31 41 51
| | | | | |
1 TTKSAPPSQV WNMTVSMTSD NSMHVKCRPP RDRNGPHERY HLEVEAGNTL VRNESHKNCD 60
61 FRVKDLQYST DYTFKAYFHN GDYPGEPFIL HHSTSYNSKA LIAFLAFLII VTSIALLVVL 120
121 YKIYDLHKKR SCNLDEQQEL VERDDE
|
| Detection Method: | |
| Confidence: | 21.0 |
| Match: | 1qg3A |
| Description: | Integin beta-4 subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [623-1304] |
1 11 21 31 41 51
| | | | | |
1 KQLMNVEPIH ADILLETYKR KIADEGRLFL AEFQSIPRVF SKFPIKEARK PFNQNKNRYV 60
61 DILPYDYNRV ELSEINGDAG SNYINASYID GFKEPRKYIA AQGPRDETVD DFWRMIWEQK 120
121 ATVIVMVTRC EEGNRNKCAE YWPSMEEGTR AFGDVVVKIN QHKRCPDYII QKLNIVNKKE 180
181 KATGREVTHI QFTSWPDHGV PEDPHLLLKL RRRVNAFSNF FSGPIVVHCS AGVGRTGTYI 240
241 GIDAMLEGLE AENKVDVYGY VVKLRRQRCL MVQVEAQYIL IHQALVEYNQ FGETEVNLSE 300
301 LHPYLHNMKK RDPPSEPSPL EAEFQRLPSY RSWRTQHIGN QEENKSKNRN SNVIPYDYNR 360
361 VPLKHELEMS KESEHDSDES SDDDSDSEEP SKYINASFIM SYWKPEVMIA AQGPLKETIG 420
421 DFWQMIFQRK VKVIVMLTEL KHGDQEICAQ YWGEGKQTYG DIEVDLKDTD KSSTYTLRVF 480
481 ELRHSKRKDS RTVYQYQYTN WSVEQLPAEP KELISMIQVV KQKLPQKNSS EGNKHHKSTP 540
541 LLIHCRDGSQ QTGIFCALLN LLESAETEEV VDIFQVVKAL RKARPGMVST FEQYQFLYDV 600
601 IASTYPAQNG QVKKNNHQED KIEFDNEVDK VKQDANCVNP LGAPEKLPEA KEQAEGSEPT 660
661 SGTEGPEHSV NGPASPALNQ GS
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1ygrA |
| Description: | Crystal structure of the tandem phosphatase domain of RPTP CD45 |
Matching Structure (courtesy of the PDB): |
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