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View Structure Prediction Details

Protein: CBL11_ARATH
Organism: Arabidopsis thaliana
Length: 668 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CBL11_ARATH.

Description E-value Query
Range
Subject
Range
gi|7487380, gi|4... - gi|7487380|pir||T06041 hypothetical protein T24A18.60 - Arabidopsis thaliana, gi|7269564|emb|CAB7956...
1022.0 [0..1] [668..50]

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Predicted Domain #1
Region A:
Residues: [1-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLRYVHLN LLLLLLPLIN LQFPTLSLAQ DYDEPKKDDT PPPGLARCNG VYMSYSSGGR  60
   61 EKLYPRTTNA TAQAWSFKST AMIVNTGIEE VKGWQMFVGF HHREIIVSAT GAVSSDGDFP 120
  121 VDATNGTTFI GSQNTDLKTS ILTAGDYTQI STNIEITGTV FGGKGTATPM PKSIKLTNDG 180
  181 WQCPAATSKG GTMQVCCKRN PKFKAKEKVK TKF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [214-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRQHGDLNI IYDVLQAYAS SYMAQVTIDN TSPLGRLDHW NLTWEWMRGE FIHSMRGAYA  60
   61 AEKNTLECLS SKAGQFYGDL DFSQVANCQK KPIIKDLPAE RKDDNVTGKL PFCCKNGTLL 120
  121 PTHMDPSKSK AIFQLQVYKV PPDQNRTAFF PPRNWKIDGI VNPTYKCGPP IRVDATPFPD 180
  181 PSGLQATTYA IASWQVICNI TKPKPQAARC CVSFSAFYND SAIPCNTCAC GCKDIDT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 133.080922
Match: PF04833.6
Description: No description for PF04833.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [451-529]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DTCNANARQL LLPTDTLLVP FDNRTLKAKV WAKQKHMAYP KKLPCPDNCG ISLNWHLNSD  60
   61 YGNGWSARVT LFNWGNNAV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [530-668]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDWFGALDLG KAGLGYENIY SFNGSRVPPK NQTIFFQGLP GMNYLIGITN GTNPARDPQI  60
   61 PGKMQSVISF KKKNLGSLNI IGGDGFPKRV FFNGEECELP KYFPKKSSGM RLSGIRFLPS 120
  121 ILLAITTFHA ITDRLLTGV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle