| Protein: | BXD1_ORYSA, BXDC... |
| Organism: | Oryza sativa |
| Length: | 310 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BXD1_ORYSA, BXDC....
| Description | E-value | Query Range |
Subject Range |
|
|
295.0 | [0..4] | [308..6] |
|
Region A: Residues: [1-130] |
1 11 21 31 41 51
| | | | | |
1 MVAAIRVPRS QRAKRELLKH APKLVETGKK TLILHGTKTS AVLNSVLADL FHLKRDNAVK 60
61 YSKKNDNIRP FESGGETSLE FFSLKTDCSL IVYGSHSKKR PNNLVLGRTY DHHIYDLVEV 120
121 GVENYKSIES
|
| Detection Method: |  |
| Confidence: | 6.522879 |
| Match: | 2cxhA |
| Description: | Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| aminoacyl-tRNA ligase activity | 3.87211694771248 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 3.87184649959884 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 3.87184649959884 | bayes_pls_golite062009 |
| ligase activity | 2.64230127203047 | bayes_pls_golite062009 |
| proline-tRNA ligase activity | 2.35871952544841 | bayes_pls_golite062009 |
| binding | 1.78917266819015 | bayes_pls_golite062009 |
| catalytic activity | 0.902495165806215 | bayes_pls_golite062009 |
| protein binding | 0.665778090365515 | bayes_pls_golite062009 |
|
Region A: Residues: [131-215] |
1 11 21 31 41 51
| | | | | |
1 YVYDKKLAPK LGSKPFFAFI GEHFESVEEL KHLKEVLLDL FKGEVVENLN LAGVDRVFVC 60
61 TAISPTTVYM MHCALRLKRS GTSIP
|
| Detection Method: | |
| Confidence: | 1.27 |
| Match: | 2cxhA |
| Description: | Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [216-310] |
1 11 21 31 41 51
| | | | | |
1 RIELVEVGPS MDLVVRRHRY PVESLKKEAM KTADHAKKMK NVTKDPVHGK LGKVYIPDQQ 60
61 IAKMSLSNDV KGLKRERREA KKNKDHSKKQ KINPE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
