YRC Public Data Repository - Protein Structure Prediction

Protein:	BTUE_ECOLI
Organism:	Escherichia coli
Length:	183 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BTUE_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|49611289, gi\|... - gi\|50120763\|ref\|YP_049930.1\| putative glutathione peroxidase [Pectobacterium atrosepticum SCRI1043],...	171.0	[0..1]	[183..1]
gi\|21245058, gi\|... - gi\|21245058\|ref\|NP_644640.1\| glutathione peroxidase [Xanthomonas axonopodis pv. citri str. 306], gi\|...	171.0	[0..1]	[182..1]
gi\|78038443, gi\|... - gi\|78050013\|ref\|YP_366188.1\| glutathione peroxidase [Xanthomonas campestris pv. vesicatoria str. 85-...	171.0	[0..1]	[182..1]
gi\|84326674, gi\|... - gi\|84326674\|ref\|ZP_00974699.1\| COG0386: Glutathione peroxidase [Pseudomonas aeruginosa 2192], gi\|254...	169.0	[0..1]	[183..1]
gi\|56420320, gi\|... - gi\|56420320\|ref\|YP_147638.1\| glutathione peroxidase [Geobacillus kaustophilus HTA426], gi\|56380162\|d...	169.0	[0..4]	[181..2]
gi\|91688090, gi\|... - gi\|91784136\|ref\|YP_559342.1\| glutathione peroxidase [Burkholderia xenovorans LB400], gi\|91688090\|gb\|...	168.0	[0..3]	[181..2]
gi\|84625969, gi\|... - gi\|84625969\|ref\|YP_453341.1\| glutathione peroxidase [Xanthomonas oryzae pv. oryzae MAFF 311018], gi\|... gi\|188523648, gi... - gi\|188579196\|ref\|YP_001916125.1\| glutathione peroxidase [Xanthomonas oryzae pv. oryzae PXO99A], gi\|1...	168.0	[0..1]	[181..1]
gi\|115373461, gi... - gi\|115373461\|ref\|ZP_01460758.1\| glutathione peroxidase [Stigmatella aurantiaca DW4/3-1], gi\|11536946...	166.0	[0..1]	[182..1]
gi\|67097789, gi\|... - gi\|67668648\|ref\|ZP_00465734.1\| Glutathione peroxidase [Burkholderia cenocepacia HI2424], gi\|67097789... gi\|74021136, gi\|... - gi\|89899296\|ref\|YP_521767.1\| glutathione peroxidase [Rhodoferax ferrireducens T118], gi\|89344033\|gb\|...	166.0	[0..3]	[182..2]
gi\|117921316, gi... - gi\|78688333\|ref\|ZP_00853036.1\| Glutathione peroxidase [Shewanella sp. ANA-3], gi\|78503926\|gb\|EAP1751...	166.0	[0..1]	[182..1]

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Predicted Domain #1

Region A:
Residues: [1-183]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQDSILTTVV KDIDGEVTTL EKFAGNVLLI VNVASKCGLT PQYEQLENIQ KAWVDRGFMV  60
   61 LGFPCNQFLE QEPGSDEEIK TYCTTTWGVT FPMFSKIEVN GEGRHPLYQK LIAAAPTAVA 120
  121 PEESGFYARM VSKGRAPLYP DDILWNFEKF LVGRDGKVIQ RFSPDMTPED PIVMESIKLA 180
  181 LAK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	32.69897
Match:	2p5qA
Description:	No description for 2p5qA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits