YRC Public Data Repository - Protein Structure Prediction

Protein:	BIRC5_PIG
Organism:	Sus scrofa
Length:	142 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BIRC5_PIG.

Description	E-value	Query Range	Subject Range
gi\|67969107 - gi\|67969107\|dbj\|BAE00908.1\| unnamed protein product [Macaca fascicularis]	169.0	[0..1]	[140..1]
BIRC5_CANLF - Baculoviral IAP repeat-containing protein 5 OS=Canis lupus familiaris GN=BIRC5 PE=2 SV=2	165.0	[0..1]	[142..1]
BIRC5_RAT - Baculoviral IAP repeat-containing protein 5 OS=Rattus norvegicus GN=Birc5 PE=2 SV=1	163.0	[0..1]	[140..1]
BIRC5_FELCA - Baculoviral IAP repeat-containing protein 5 OS=Felis catus GN=BIRC5 PE=2 SV=1	163.0	[0..1]	[142..1]
BIRC5_BOVIN - Baculoviral IAP repeat-containing protein 5 OS=Bos taurus GN=BIRC5 PE=2 SV=2	161.0	[0..1]	[142..1]
BIRC5_MOUSE - Baculoviral IAP repeat-containing protein 5 OS=Mus musculus GN=Birc5 PE=1 SV=1	161.0	[0..1]	[140..1]
gi\|109118487 - gi\|109118487\|ref\|XP_001108164.1\| PREDICTED: similar to baculoviral IAP repeat-containing protein 5 i...	160.0	[0..1]	[140..1]
gi\|114670699, gi... - gi\|114670699\|ref\|XP_001156931.1\| PREDICTED: baculoviral IAP repeat-containing protein 5 isoform 6 [P...	160.0	[0..1]	[140..1]

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Predicted Domain #1

Region A:
Residues: [1-142]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPSLPPAW QLYLKDHRIS TFKNWPFLEG CACTPERMAA AGFIHCPTEN EPDLAQCFFC  60
   61 FKELEGWEPD DDPIEEHKKH SSGCAFLSVK KQFEELTLSE FLKLDKERAK NKIAKETNNK 120
  121 QKEFEETAKK VRCAIEQLAA SE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	40.39794
Match:	1m4mA
Description:	Anti-apoptotic protein survivin
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits