YRC Public Data Repository - Protein Structure Prediction

Protein:	BDBC_OCEIH
Organism:	Oceanobacillus iheyensis
Length:	145 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BDBC_OCEIH.

Description	E-value	Query Range	Subject Range
gi\|167049118, gi... - gi\|167401422\|ref\|ZP_02306919.1\| disulfide bond formation protein DsbB [Yersinia pestis biovar Antiqu... gi\|21959020, gi\|... - gi\|22126066\|ref\|NP_669489.1\| disulfide bond formation protein B [Yersinia pestis KIM], gi\|21959020\|g... gi\|45441745, gi\|... - gi\|45441745\|ref\|NP_993284.1\| disulfide bond formation protein B [Yersinia pestis biovar Microtus str...	127.0	[0..7]	[144..26]
gi\|145209983, gi... - gi\|145598287\|ref\|YP_001162363.1\| disulfide bond formation protein B [Yersinia pestis Pestoides F], g... gi\|162418534, gi... - gi\|77634461\|ref\|ZP_00796561.1\| COG1495: Disulfide bond formation protein DsbB [Yersinia pestis Angol... gi\|166208217, gi... - gi\|166211037\|ref\|ZP_02237072.1\| disulfide bond formation protein DsbB [Yersinia pestis biovar Antiqu... gi\|167420037, gi... - gi\|167420037\|ref\|ZP_02311790.1\| disulfide bond formation protein DsbB [Yersinia pestis biovar Orient... gi\|152958494, gi... - gi\|77629153\|ref\|ZP_00791739.1\| COG1495: Disulfide bond formation protein DsbB [Yersinia pseudotuberc... gi\|165927701, gi... - gi\|165927701\|ref\|ZP_02223533.1\| disulfide bond formation protein DsbB [Yersinia pestis biovar Orient... gi\|165991865, gi... - gi\|166009310\|ref\|ZP_02230208.1\| disulfide bond formation protein DsbB [Yersinia pestis biovar Antiqu... gi\|167426569, gi... - gi\|167426569\|ref\|ZP_02318322.1\| disulfide bond formation protein DsbB [Yersinia pestis biovar Mediae... gi\|108811773, gi... - gi\|108811773\|ref\|YP_647540.1\| disulfide bond formation protein B [Yersinia pestis Nepal516], gi\|1087... gi\|108807497, gi... - gi\|108807497\|ref\|YP_651413.1\| disulfide bond formation protein B [Yersinia pestis Antiqua], gi\|10877... gi\|89104356, gi\|... - gi\|89104356\|ref\|ZP_01176901.1\| COG1495: Disulfide bond formation protein DsbB [Yersinia pestis biova...	127.0	[0..7]	[144..15]
gi\|47566517, gi\|... - gi\|47566517\|ref\|YP_022469.1\| DsbB family disulfide bond formation protein [Bacillus anthracis str. '... gi\|21392881, gi\|... - gi\|21392881\|ref\|NP_652961.1\| DsbB family disulfide bond formation protein [Bacillus anthracis str. A... BDBC2_BACAN - Probable disulfide formation protein C 2 OS=Bacillus anthracis GN=bdbC2 PE=3 SV=1 gi\|254739184 - gi\|254739184\|ref\|ZP_05196886.1\| disulfide bond formation protein C [Bacillus anthracis str. Western ... gi\|254744983 - gi\|254744983\|ref\|ZP_05202660.1\| disulfide bond formation protein C [Bacillus anthracis str. Kruger B... gi\|227007922, gi... - gi\|227811626\|ref\|YP_002811637.1\| disulfide bond formation protein C [Bacillus anthracis str. CDC 684... gi\|254687696 - gi\|254687696\|ref\|ZP_05151552.1\| disulfide bond formation protein C [Bacillus anthracis str. CNEVA-90... gi\|254756382 - gi\|254756382\|ref\|ZP_05208411.1\| disulfide bond formation protein C [Bacillus anthracis str. Vollum] gi\|254762460 - gi\|254762460\|ref\|ZP_05214300.1\| disulfide bond formation protein C [Bacillus anthracis str. Australi... gi\|208743371 - gi\|208743371\|ref\|YP_002267822.1\| DsbB family disulfide bond formation protein [Bacillus cereus]	127.0	[0..4]	[143..1]
gi\|152023214, gi... - gi\|89200501\|ref\|ZP_01179254.1\| Disulphide bond formation protein DsbB [Bacillus cereus subsp. cytoto...	127.0	[0..6]	[127..5]
BDBC2_BACC1 - Probable disulfide formation protein C 2 OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=bdbC2 P... gi\|217956908, gi... - gi\|217956908\|ref\|YP_002336004.1\| disulfide bond formation protein C [Bacillus cereus AH187], gi\|2170... gi\|229035351, gi... - gi\|229035351\|ref\|ZP_04189257.1\| disulfide formation protein C 2 [Bacillus cereus AH1271], gi\|2287279... gi\|190015513, gi... - gi\|190015513\|ref\|YP_001967374.1\| disulfide oxidoreductase, DsbB family [Bacillus cereus], gi\|1165844... gi\|228641198, gi... - gi\|229142260\|ref\|ZP_04270782.1\| disulfide formation protein C 2 [Bacillus cereus BDRD-ST26], gi\|2286...	124.0	[0..4]	[136..1]
gi\|190908699, gi... - gi\|191170967\|ref\|ZP_03032518.1\| disulfide bond formation protein DsbB [Escherichia coli F11], gi\|190... DSBB_ECOL5 - Disulfide bond formation protein B OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=dsbB PE=3 S...	124.0	[0..9]	[145..12]
gi\|194423929, gi... - gi\|194436946\|ref\|ZP_03069045.1\| disulfide bond formation protein DsbB [Escherichia coli 101-1], gi\|1... gi\|194411232, gi... - gi\|194430724\|ref\|ZP_03063149.1\| disulfide bond formation protein DsbB [Escherichia coli B171], gi\|19... gi\|193071179, gi... - gi\|193071179\|ref\|ZP_03052102.1\| disulfide bond formation protein DsbB [Escherichia coli E110019], gi... gi\|89108030, gi\|... - gi\|89108030\|ref\|AP_001810.1\| oxidoreductase that catalyzes reoxidation of DsbA protein disulfide iso... gi\|170517679, gi... - gi\|170679961\|ref\|YP_001744016.1\| disulfide bond formation protein DsbB [Escherichia coli SMS-3-5], g... DSBB_SHIDS - Disulfide bond formation protein B OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=dsbB PE=3 SV... gi\|218431797, gi... - gi\|218704700\|ref\|YP_002412219.1\| disulfide bond formation protein B [Escherichia coli UMN026], gi\|21... gi\|218351431, gi... - gi\|218694699\|ref\|YP_002402366.1\| disulfide bond formation protein B [Escherichia coli 55989], gi\|218... gi\|218360508, gi... - gi\|218553740\|ref\|YP_002386653.1\| disulfide bond formation protein B [Escherichia coli IAI1], gi\|2183... gi\|195938840 - gi\|195938840\|ref\|ZP_03084222.1\| disulfide bond formation protein B [Escherichia coli O157:H7 str. EC... gi\|168771076, gi... - gi\|189360078\|gb\|EDU78497.1\| disulfide bond formation protein DsbB [Escherichia coli O157:H7 str. EC4... DSBB_ECO57 - Disulfide bond formation protein B OS=Escherichia coli O157:H7 GN=dsbB PE=3 SV=1 gi\|189356325, gi... - gi\|189356325\|gb\|EDU74744.1\| disulfide bond formation protein DsbB [Escherichia coli O157:H7 str. EC4... gi\|170080813, gi... - gi\|170080813\|ref\|YP_001730133.1\| oxidoreductase that catalyzes reoxidation of DsbA protein disulfide... gi\|170020447, gi... - gi\|170020447\|ref\|YP_001725401.1\| disulfide bond formation protein B [Escherichia coli ATCC 8739], gi... EG11393 - oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I / Disulfide oxidored... gi\|189372462, gi... - gi\|189372462\|gb\|EDU90878.1\| disulfide bond formation protein DsbB [Escherichia coli O157:H7 str. EC8... gi\|189000025, gi... - gi\|189000025\|gb\|EDU69011.1\| disulfide bond formation protein DsbB [Escherichia coli O157:H7 str. EC4... gi\|124498072, gi... - gi\|124532287\|ref\|ZP_01702181.1\| Disulphide bond formation protein DsbB [Escherichia coli B], gi\|1244... gi\|157160688, gi... - gi\|157160688\|ref\|YP_001458006.1\| disulfide bond formation protein B [Escherichia coli HS], gi\|157066... EG11393 - oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I / Disulfide oxidored... gi\|15830934, gi\|... - gi\|15830934\|ref\|NP_309707.1\| disulfide bond formation protein B [Escherichia coli O157:H7 str. Sakai... DSBB_ECOLI - Disulfide bond formation protein B (Disulfide oxidoreductase) - Escherichia coli gi\|251784692, gi... - gi\|251784692\|ref\|YP_002998996.1\| hypothetical protein B21_01170 [Escherichia coli BL21], gi\|24237696... gi\|238900416, gi... - gi\|238900416\|ref\|YP_002926212.1\| oxidoreductase that catalyzes reoxidation of DsbA protein disulfide... gi\|253973168, gi... - gi\|254161267\|ref\|YP_003044375.1\| disulfide bond formation protein B [Escherichia coli B str. REL606]... gi\|253977382, gi... - gi\|254288075\|ref\|YP_003053823.1\| disulfide bond formation protein B [Escherichia coli BL21(DE3)], gi... gi\|254592062, gi... - gi\|254792662\|ref\|YP_003077499.1\| oxidoreductase that catalyzes reoxidation of DsbA protein disulfide...	123.0	[0..9]	[145..12]
DSBB_YERPA - Disulfide bond formation protein B OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=dsbB PE=3 SV=2 DSBB_YERPS - Disulfide bond formation protein B OS=Yersinia pseudotuberculosis GN=dsbB PE=3 SV=1 DSBB_YERPN - Disulfide bond formation protein B OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=dsbB PE=3 SV=... DSBB_YERPP - Disulfide bond formation protein B OS=Yersinia pestis (strain Pestoides F) GN=dsbB PE=3 SV=2 gi\|16122376, gi\|... - gi\|218929244\|ref\|YP_002347119.1\| disulfide bond formation protein B [Yersinia pestis CO92], gi\|16122... gi\|186895440, gi... - gi\|186895440\|ref\|YP_001872552.1\| disulfide bond formation protein B [Yersinia pseudotuberculosis PB1... gi\|161511387 - gi\|161511387\|ref\|NP_993284.2\| disulfide bond formation protein B [Yersinia pestis biovar Microtus st... DSBB_YERPS - Disulfide bond formation protein B OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=dsb... gi\|161484799 - gi\|161484799\|ref\|NP_669489.2\| disulfide bond formation protein B [Yersinia pestis KIM] DSBB_YERPE - Disulfide bond formation protein B OS=Yersinia pestis GN=dsbB PE=3 SV=1 gi\|229693898, gi... - gi\|229897561\|ref\|ZP_04512717.1\| oxidoreductase that catalyzes reoxidation of DsbA protein disulfide ... gi\|229702290, gi... - gi\|229894817\|ref\|ZP_04509997.1\| oxidoreductase that catalyzes reoxidation of DsbA protein disulfide ... gi\|229688772, gi... - gi\|229898206\|ref\|ZP_04513354.1\| oxidoreductase that catalyzes reoxidation of DsbA protein disulfide ... gi\|149292346, gi... - gi\|149365933\|ref\|ZP_01887968.1\| disulfide bond formation protein B [Yersinia pestis CA88-4125], gi\|1...	123.0	[0..7]	[144..10]
DSBB_ECOK1 - Disulfide bond formation protein B OS=Escherichia coli O1:K1 / APEC GN=dsbB PE=3 SV=2 gi\|218364878, gi... - gi\|218558109\|ref\|YP_002391022.1\| disulfide bond formation protein B [Escherichia coli S88], gi\|21836... gi\|215264485, gi... - gi\|215486413\|ref\|YP_002328844.1\| disulfide bond formation protein B [Escherichia coli O127:H6 str. E... DSBB_ECOL6 - Disulfide bond formation protein B OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN... DSBB_ECOL6 - Disulfide bond formation protein B OS=Escherichia coli O6 GN=dsbB PE=3 SV=1 DSBB_ECOUT - Disulfide bond formation protein B OS=Escherichia coli (strain UTI89 / UPEC) GN=dsbB PE=3 SV=2	123.0	[0..9]	[145..12]
DSBB_SHIFL - Disulfide bond formation protein B OS=Shigella flexneri GN=dsbB PE=3 SV=2 gi\|56383392, gi\|... - gi\|56479841\|ref\|NP_707082.2\| disulfide bond formation protein B [Shigella flexneri 2a str. 301], gi\|... gi\|191168526, gi... - gi\|191168526\|ref\|ZP_03030312.1\| disulfide bond formation protein DsbB [Escherichia coli B7A], gi\|190... gi\|30040950, gi\|... - gi\|30062702\|ref\|NP_836873.1\| disulfide bond formation protein B [Shigella flexneri 2a str. 2457T], g... gi\|188494784, gi... - gi\|188494784\|ref\|ZP_03002054.1\| disulfide bond formation protein DsbB [Escherichia coli 53638], gi\|1... DSBB_SHIF8 - Disulfide bond formation protein B OS=Shigella flexneri serotype 5b (strain 8401) GN=dsbB PE=3 SV=1	123.0	[0..9]	[145..12]

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Predicted Domain #1

Region A:
Residues: [1-145]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLTKKAEN LLLLIWVQAF LALAGSLFYS EVMNYVPCEL CWYQRILMYP LVLIYGVAAI  60
   61 KKDISFALPG LFMSGIGLLV STYHYLVQHV SIFQEVGGAC SGSVPCNVIY VNYFGFISIP 120
  121 FMAGVAFLII FVLHLLILRE QGRKA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	28.0
Match:	2hi7B
Description:	No description for 2hi7B was found.

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.015349122465922	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: