YRC Public Data Repository - Protein Structure Prediction

Protein:	BDBC_CHLCV
Organism:	Chlamydophila caviae
Length:	136 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BDBC_CHLCV.

Description	E-value	Query Range	Subject Range
gi\|47566517, gi\|... - gi\|47566517\|ref\|YP_022469.1\| DsbB family disulfide bond formation protein [Bacillus anthracis str. '... gi\|21392881, gi\|... - gi\|21392881\|ref\|NP_652961.1\| DsbB family disulfide bond formation protein [Bacillus anthracis str. A... BDBC2_BACAN - Probable disulfide formation protein C 2 OS=Bacillus anthracis GN=bdbC2 PE=3 SV=1 gi\|254739184 - gi\|254739184\|ref\|ZP_05196886.1\| disulfide bond formation protein C [Bacillus anthracis str. Western ... gi\|254744983 - gi\|254744983\|ref\|ZP_05202660.1\| disulfide bond formation protein C [Bacillus anthracis str. Kruger B... gi\|227007922, gi... - gi\|227811626\|ref\|YP_002811637.1\| disulfide bond formation protein C [Bacillus anthracis str. CDC 684... gi\|254687696 - gi\|254687696\|ref\|ZP_05151552.1\| disulfide bond formation protein C [Bacillus anthracis str. CNEVA-90... gi\|254756382 - gi\|254756382\|ref\|ZP_05208411.1\| disulfide bond formation protein C [Bacillus anthracis str. Vollum] gi\|254762460 - gi\|254762460\|ref\|ZP_05214300.1\| disulfide bond formation protein C [Bacillus anthracis str. Australi... gi\|208743371 - gi\|208743371\|ref\|YP_002267822.1\| DsbB family disulfide bond formation protein [Bacillus cereus]	124.0	[0..2]	[136..1]
BDBC_CHLPN - Probable disulfide formation protein OS=Chlamydia pneumoniae GN=CPn_0227 PE=3 SV=1 gi\|16752812, gi\|... - gi\|8163454\|gb\|AAF73684.1\| lipoprotein, putative [Chlamydophila pneumoniae AR39], gi\|16752812\|ref\|NP_... gi\|15835762, gi\|... - gi\|8978600\|dbj\|BAA98437.1\| disulfide bond oxidoreductase [Chlamydophila pneumoniae J138], gi\|1583576... gi\|15618151, gi\|... - gi\|4376500\|gb\|AAD18380.1\| Disulfide bond Oxidoreductase [Chlamydophila pneumoniae CWL029], gi\|156181...	122.0	[0..1]	[135..1]
gi\|33236076, gi\|... - gi\|33241568\|ref\|NP_876509.1\| putative disulfide oxidoreductase [Chlamydophila pneumoniae TW-183], gi...	122.0	[0..1]	[135..2]
BDBC2_BACC1 - Probable disulfide formation protein C 2 OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=bdbC2 P... gi\|217956908, gi... - gi\|217956908\|ref\|YP_002336004.1\| disulfide bond formation protein C [Bacillus cereus AH187], gi\|2170... gi\|229035351, gi... - gi\|229035351\|ref\|ZP_04189257.1\| disulfide formation protein C 2 [Bacillus cereus AH1271], gi\|2287279... gi\|190015513, gi... - gi\|190015513\|ref\|YP_001967374.1\| disulfide oxidoreductase, DsbB family [Bacillus cereus], gi\|1165844... gi\|228641198, gi... - gi\|229142260\|ref\|ZP_04270782.1\| disulfide formation protein C 2 [Bacillus cereus BDRD-ST26], gi\|2286...	120.0	[0..2]	[135..1]
gi\|89331594, gi\|... - gi\|89898222\|ref\|YP_515332.1\| putative disulfide oxidoreductase [Chlamydophila felis Fe/C-56], gi\|893...	119.0	[0..1]	[136..1]
gi\|62185179, gi\|... - gi\|62185179\|ref\|YP_219964.1\| putative disulfide oxidoreductase [Chlamydophila abortus S26/3], gi\|621...	119.0	[0..1]	[136..1]
gi\|145209983, gi... - gi\|145598287\|ref\|YP_001162363.1\| disulfide bond formation protein B [Yersinia pestis Pestoides F], g... gi\|162418534, gi... - gi\|77634461\|ref\|ZP_00796561.1\| COG1495: Disulfide bond formation protein DsbB [Yersinia pestis Angol... gi\|166208217, gi... - gi\|166211037\|ref\|ZP_02237072.1\| disulfide bond formation protein DsbB [Yersinia pestis biovar Antiqu... gi\|167420037, gi... - gi\|167420037\|ref\|ZP_02311790.1\| disulfide bond formation protein DsbB [Yersinia pestis biovar Orient... gi\|152958494, gi... - gi\|77629153\|ref\|ZP_00791739.1\| COG1495: Disulfide bond formation protein DsbB [Yersinia pseudotuberc... gi\|165927701, gi... - gi\|165927701\|ref\|ZP_02223533.1\| disulfide bond formation protein DsbB [Yersinia pestis biovar Orient... gi\|165991865, gi... - gi\|166009310\|ref\|ZP_02230208.1\| disulfide bond formation protein DsbB [Yersinia pestis biovar Antiqu... gi\|167426569, gi... - gi\|167426569\|ref\|ZP_02318322.1\| disulfide bond formation protein DsbB [Yersinia pestis biovar Mediae... gi\|108811773, gi... - gi\|108811773\|ref\|YP_647540.1\| disulfide bond formation protein B [Yersinia pestis Nepal516], gi\|1087... gi\|108807497, gi... - gi\|108807497\|ref\|YP_651413.1\| disulfide bond formation protein B [Yersinia pestis Antiqua], gi\|10877... gi\|89104356, gi\|... - gi\|89104356\|ref\|ZP_01176901.1\| COG1495: Disulfide bond formation protein DsbB [Yersinia pestis biova...	116.0	[0..1]	[135..6]
gi\|167049118, gi... - gi\|167401422\|ref\|ZP_02306919.1\| disulfide bond formation protein DsbB [Yersinia pestis biovar Antiqu... gi\|21959020, gi\|... - gi\|22126066\|ref\|NP_669489.1\| disulfide bond formation protein B [Yersinia pestis KIM], gi\|21959020\|g... gi\|45441745, gi\|... - gi\|45441745\|ref\|NP_993284.1\| disulfide bond formation protein B [Yersinia pestis biovar Microtus str...	116.0	[0..1]	[135..17]
gi\|152023214, gi... - gi\|89200501\|ref\|ZP_01179254.1\| Disulphide bond formation protein DsbB [Bacillus cereus subsp. cytoto...	115.0	[0..8]	[122..9]
BDBC_CHLMU - Probable disulfide formation protein OS=Chlamydia muridarum (strain MoPn / Nigg) GN=TC_0448 PE=3 SV=... BDBC_CHLMU - Probable disulfide formation protein OS=Chlamydia muridarum GN=TC_0448 PE=3 SV=1	114.0	[0..1]	[135..1]

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Predicted Domain #1

Region A:
Residues: [1-136]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRFLRNNAL YFAWLICSTG TVMSIYYSYL LNIEPCVLCY YQRICLFPLS IILGIATYRE  60
   61 DNLVKIYALP LSITGMVIAV YQICLQEISG MTIDICGRVS CSTKLFVFGF ITVPMASALA 120
  121 FCAISCLLIL SGSKKK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	24.522879
Match:	2hi7B
Description:	No description for 2hi7B was found.

Predicted functions:

Term	Confidence	Notes
disulfide oxidoreductase activity	0.912395958053277	bayes_pls_golite062009
binding	0.772353333465834	bayes_pls_golite062009
catalytic activity	0.545407789079971	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: