YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: B2MG_DANRE
Organism: Danio rerio
Length: 116 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for B2MG_DANRE.

Description E-value Query
Range
Subject
Range
gi|506666 - gi|506666|gb|AAA88852.1| MHC class I A
167.0 [0..2] [115..179]
gi|51863449 - gi|51863449|gb|AAU11832.1| MHC class I heavy chain antigen [Macaca mulatta]
165.0 [0..2] [115..187]
gi|113473637 - gi|113473637|gb|AAY57220.2| MHC class I antigen heavy chain [Macaca fascicularis]
165.0 [0..2] [115..184]

Back

Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRALITFALL CLLYITVQGK VSTPKVHVYS HFPGEYGKPN TLICYVSSFH PPDISIELLK  60
   61 NGQVMSDTKQ TDLAFEKGWQ FHLTKSVAFT PEKGDEYTCS VRHMKETKKF SWEPNM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.30103
Match: 1py4A
Description: Beta2 microglobulin mutant H31Y displays hints for amyloid formations
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle