YRC Public Data Repository - Protein Structure Prediction

Protein:	AROM_ECOLI
Organism:	Escherichia coli
Length:	225 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AROM_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|145383 - gi\|145383\|gb\|AAA83835.1\| aroM [Escherichia coli]	323.0	[0..1]	[225..1]
gi\|110804413, gi... - gi\|110804413\|ref\|YP_687933.1\| hypothetical protein SFV_0355 [Shigella flexneri 5 str. 8401], gi\|1106...	319.0	[0..1]	[225..1]
gi\|169756165, gi... - gi\|170021237\|ref\|YP_001726191.1\| hypothetical protein EcolC_3242 [Escherichia coli ATCC 8739], gi\|16... gi\|253774628, gi... - gi\|254287259\|ref\|YP_003053007.1\| hypothetical protein ECD_00337 [Escherichia coli BL21(DE3)], gi\|253... gi\|242376167, gi... - gi\|251783894\|ref\|YP_002998198.1\| hypothetical protein B21_00341 [Escherichia coli BL21], gi\|24237616... tr\|A0A109ZRU2\|A0... - Uncharacterized protein OS=Escherichia coli (strain K12) GN=C3026_01895 PE=4 SV=1 gi\|253972357, gi... - gi\|254160456\|ref\|YP_003043564.1\| hypothetical protein ECB_00337 [Escherichia coli B str. REL606], gi... gi\|188490957, gi... - gi\|75512451\|ref\|ZP_00734990.1\| hypothetical protein Ecol5_01003366 [Escherichia coli 53638], gi\|1884... gi\|83585690, gi\|... - gi\|83585690\|ref\|ZP_00924332.1\| hypothetical protein Ecol1_01003106 [Escherichia coli 101-1], gi\|1944... gi\|124528897, gi... - gi\|124528897\|ref\|ZP_01700082.1\| AroM family protein [Escherichia coli B], gi\|124500234\|gb\|EAY47710.1...	319.0	[0..1]	[225..1]
gi\|74310958, gi\|... - gi\|74310958\|ref\|YP_309377.1\| hypothetical protein SSON_0366 [Shigella sonnei Ss046], gi\|73854435\|gb\|... gi\|75237228, gi\|... - gi\|75237228\|ref\|ZP_00721275.1\| hypothetical protein EcolE1_01001686 [Escherichia coli E110019], gi\|1...	318.0	[0..1]	[225..1]
gi\|209744316, gi... - pir\|\|D85534 protein of aro operon, regulated by aroR [imported] - Escherichia coli (strain O157:H7, ... gi\|209399618, gi... - gi\|209399618\|ref\|YP_002269028.1\| AroM protein [Escherichia coli O157:H7 str. EC4115], gi\|209161018\|g... gi\|217320504, gi... - gi\|217324283\|ref\|ZP_03440367.1\| AroM protein [Escherichia coli O157:H7 str. TW14588], gi\|217320504\|g... gi\|12513233, gi\|... - gi\|15800116\|ref\|NP_286128.1\| hypothetical protein Z0486 [Escherichia coli O157:H7 EDL933], gi\|125132... gi\|13359897, gi\|... - gi\|15829694\|ref\|NP_308467.1\| AroM [Escherichia coli O157:H7], gi\|13359897\|dbj\|BAB33863.1\| aroM prote... gi\|195938549 - gi\|195938549\|ref\|ZP_03083931.1\| hypothetical protein EscherichcoliO157_19322 [Escherichia coli O157:... gi\|208808605, gi... - gi\|208808605\|ref\|ZP_03250942.1\| AroM protein [Escherichia coli O157:H7 str. EC4206], gi\|208728406\|gb... gi\|13359897, gi\|... - gi\|15829694\|ref\|NP_308467.1\| hypothetical protein ECs0440 [Escherichia coli O157:H7 str. Sakai], gi\|... gi\|208731906, gi... - gi\|208815258\|ref\|ZP_03256437.1\| AroM protein [Escherichia coli O157:H7 str. EC4045], gi\|208731906\|gb... gi\|208737039, gi... - gi\|208822846\|ref\|ZP_03263164.1\| AroM protein [Escherichia coli O157:H7 str. EC4042], gi\|208737039\|gb... gi\|187768282, gi... - gi\|187768282\|gb\|EDU32126.1\| AroM protein [Escherichia coli O157:H7 str. EC4196], gi\|168776315\|ref\|ZP... gi\|168783245, gi... - gi\|188999362\|gb\|EDU68348.1\| AroM protein [Escherichia coli O157:H7 str. EC4076], gi\|168783245\|ref\|ZP... gi\|168786226, gi... - gi\|189373525\|gb\|EDU91941.1\| AroM protein [Escherichia coli O157:H7 str. EC869], gi\|168786226\|ref\|ZP_... gi\|168800262, gi... - gi\|189377431\|gb\|EDU95847.1\| AroM protein [Escherichia coli O157:H7 str. EC508], gi\|168800262\|ref\|ZP_... gi\|188015881, gi... - gi\|188015881\|gb\|EDU54003.1\| AroM protein [Escherichia coli O157:H7 str. EC4113], gi\|168749842\|ref\|ZP... gi\|168756921, gi... - gi\|189355963\|gb\|EDU74382.1\| AroM protein [Escherichia coli O157:H7 str. EC4401], gi\|168756921\|ref\|ZP... gi\|168761585, gi... - gi\|189367975\|gb\|EDU86391.1\| AroM protein [Escherichia coli O157:H7 str. EC4501], gi\|168761585\|ref\|ZP... gi\|189362423, gi... - gi\|189362423\|gb\|EDU80842.1\| AroM protein [Escherichia coli O157:H7 str. EC4486], gi\|168768330\|ref\|ZP... gi\|254791568, gi... - gi\|254791568\|ref\|YP_003076405.1\| hypothetical protein ECSP_0452 [Escherichia coli O157:H7 str. TW143...	316.0	[0..1]	[225..1]
gi\|194428857, gi... - gi\|75209947\|ref\|ZP_00710136.1\| hypothetical protein EcolB_01002891 [Escherichia coli B171], gi\|19442...	316.0	[0..1]	[225..1]
gi\|226898829, gi... - gi\|237707619\|ref\|ZP_04538100.1\| AroM protein [Escherichia sp. 3_2_53FAA], gi\|226898829\|gb\|EEH85088.1... gi\|26106791, gi\|... - gi\|26246393\|ref\|NP_752432.1\| hypothetical protein c0498 [Escherichia coli CFT073], gi\|26106791\|gb\|AA... gi\|91071030, gi\|... - gi\|91209456\|ref\|YP_539442.1\| hypothetical protein UTI89_C0410 [Escherichia coli UTI89], gi\|91071030\|... gi\|110342244, gi... - gi\|110640652\|ref\|YP_668380.1\| hypothetical protein ECP_0450 [Escherichia coli 536], gi\|110342244\|gb\|... gi\|218364069, gi... - gi\|218557300\|ref\|YP_002390213.1\| hypothetical protein ECS88_0385 [Escherichia coli S88], gi\|21836406... gi\|75238718, gi\|... - gi\|75238718\|ref\|ZP_00722706.1\| hypothetical protein EcolF_01003376 [Escherichia coli F11], gi\|191173... gi\|117622653, gi... - gi\|117622653\|ref\|YP_851566.1\| hypothetical protein APECO1_1618 [Escherichia coli APEC O1], gi\|115511... gi\|227884605, gi... - gi\|227884605\|ref\|ZP_04002410.1\| AroM protein [Escherichia coli 83972], gi\|227838691\|gb\|EEJ49157.1\| A...	315.0	[0..1]	[225..1]
gi\|75256763, gi\|... - gi\|75256763\|ref\|ZP_00728368.1\| hypothetical protein EcolE2_01003336 [Escherichia coli E22], gi\|19306...	314.0	[0..1]	[225..1]
gi\|81239858, gi\|... - gi\|82775710\|ref\|YP_402057.1\| hypothetical protein SDY_0353 [Shigella dysenteriae Sd197], gi\|81239858...	313.0	[0..1]	[225..1]
gi\|224582226, gi... - gi\|224582226\|ref\|YP_002636024.1\| protein of aro operon, regulated by aroR [Salmonella enterica subsp... gi\|204927089, gi... - gi\|204927089\|ref\|ZP_03218291.1\| aro operon protein [Salmonella enterica subsp. enterica serovar Javi... gi\|56414455, gi\|... - gi\|56414455\|ref\|YP_151530.1\| hypothetical protein SPA2333 [Salmonella enterica subsp. enterica serov... gi\|207855872, gi... - gi\|207855872\|ref\|YP_002242523.1\| hypothetical protein SEN0373 [Salmonella enterica subsp. enterica s... gi\|238911477 - gi\|238911477\|ref\|ZP_04655314.1\| hypothetical protein SentesTe_10115 [Salmonella enterica subsp. ente... gi\|198241965, gi... - gi\|198241965\|ref\|YP_002214344.1\| aro operon protein [Salmonella enterica subsp. enterica serovar Dub... gi\|200389619, gi... - gi\|200389619\|ref\|ZP_03216230.1\| aro operon protein [Salmonella enterica subsp. enterica serovar Virc... gi\|197243100, gi... - gi\|197264845\|ref\|ZP_03164919.1\| aro operon protein [Salmonella enterica subsp. enterica serovar Sain... gi\|197094853, gi... - gi\|197363376\|ref\|YP_002143013.1\| hypothetical protein SSPA2176 [Salmonella enterica subsp. enterica ... gi\|194713424, gi... - gi\|194737922\|ref\|YP_002113421.1\| aro operon protein [Salmonella enterica subsp. enterica serovar Sch... gi\|197248244, gi... - gi\|197248244\|ref\|YP_002145371.1\| aro operon protein [Salmonella enterica subsp. enterica serovar Ago... lcl\|NC_016856.1_... - [gene=aroM] [protein=hypothetical protein] [protein_id=YP_005236077.1] [location=442552..443229] gi\|16763770, gi\|... - gi\|16763770\|ref\|NP_459385.1\| hypothetical protein STM0390 [Salmonella typhimurium LT2], gi\|16418893\|... gi\|194405705, gi... - gi\|194447401\|ref\|YP_002044423.1\| hypothetical protein SeHA_C0488 [Salmonella enterica subsp. enteric... gi\|194455272, gi... - gi\|194468908\|ref\|ZP_03074892.1\| aro operon protein [Salmonella enterica subsp. enterica serovar Kent... gi\|168819006, gi... - gi\|205344277\|gb\|EDZ31041.1\| aro operon protein [Salmonella enterica subsp. enterica serovar Weltevre... gi\|194403699, gi... - gi\|194445036\|ref\|YP_002039630.1\| aro operon protein [Salmonella enterica subsp. enterica serovar New... gi\|205349703, gi... - gi\|205349703\|gb\|EDZ36334.1\| aro operon protein [Salmonella enterica subsp. enterica serovar Hadar st... gi\|195631671, gi... - gi\|195631671\|gb\|EDX50191.1\| aro operon protein [Salmonella enterica subsp. enterica serovar Newport ... gi\|62179001, gi\|... - gi\|62179001\|ref\|YP_215418.1\| hypothetical protein SC0431 [Salmonella enterica subsp. enterica serova... gi\|197289524, gi... - gi\|197289524\|gb\|EDY28887.1\| aro operon protein [Salmonella enterica subsp. enterica serovar Schwarze... gi\|205340356, gi... - gi\|205340356\|gb\|EDZ27120.1\| aro operon protein [Salmonella enterica subsp. enterica serovar Heidelbe... gi\|167992233, gi... - gi\|205329514\|gb\|EDZ16278.1\| aro operon protein [Salmonella enterica subsp. enterica serovar 4,[5],12... gi\|168232357, gi... - gi\|205333353\|gb\|EDZ20117.1\| aro operon protein [Salmonella enterica subsp. enterica serovar Kentucky... gi\|205323413, gi... - gi\|205323413\|gb\|EDZ11252.1\| aro operon protein [Salmonella enterica subsp. enterica serovar Saintpau...	301.0	[0..1]	[225..1]

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Predicted Domain #1

Region A:
Residues: [1-225]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASLAILTI GIVPMQEVLP LLTEYIDEDN ISHHSLLGKL SREEVMAEYA PEAGEDTILT  60
   61 LLNDNQLAHV SRRKVERDLQ GVVEVLDNQG YDVILLMSTA NISSMTARNT IFLEPSRILP 120
  121 PLVSSIVEDH QVGVIVPVEE MLPVQAQKWQ ILQKSPVFSL GNPIHDSEQK IIDAGKELLA 180
  181 KGADVIMLDC LGFHQRHRDL LQKQLDVPVL LSNVLIARLA AELLV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	4.69897
Match:	2eq5A
Description:	No description for 2eq5A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits