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View Structure Prediction Details

Protein: AROB_ECOLI
Organism: Escherichia coli
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AROB_ECOLI.

Description E-value Query
Range		 Subject
Range
AROB_VIBVY - 3-dehydroquinate synthase OS=Vibrio vulnificus (strain YJ016) GN=aroB PE=3 SV=1
 356.0 [0..1] [361..6]
gi|161486596 - gi|161486596|ref|NP_935781.2| 3-dehydroquinate synthase [Vibrio vulnificus YJ016]
AROB_VIBVU - 3-dehydroquinate synthase OS=Vibrio vulnificus (strain CMCP6) GN=aroB PE=3 SV=1
AROB_VIBVU - 3-dehydroquinate synthase OS=Vibrio vulnificus GN=aroB PE=3 SV=1
 356.0 [0..1] [361..1]
AROB_SHEPC - 3-dehydroquinate synthase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=aroB PE=3 SV=1
 354.0 [0..1] [361..2]
AROB_SHESW - 3-dehydroquinate synthase OS=Shewanella sp. (strain W3-18-1) GN=aroB PE=3 SV=1
 353.0 [0..1] [361..2]
gi|84390817, gi|... - gi|84390817|ref|ZP_00991509.1| 3-dehydroquinate synthase [Vibrio splendidus 12B01], gi|84376620|gb|E...
 352.0 [0..1] [361..1]
AROB_SHESR - 3-dehydroquinate synthase OS=Shewanella sp. (strain MR-7) GN=aroB PE=3 SV=1
 351.0 [0..2] [361..3]
gi|85834895, gi|... - gi|86147330|ref|ZP_01065644.1| 3-dehydroquinate synthase [Vibrio sp. MED222], gi|85834895|gb|EAQ5303...
 350.0 [0..1] [361..1]
gi|116183288, gi... - gi|75853727|ref|ZP_00761502.1| COG0337: 3-dehydroquinate synthetase [Vibrio sp. Ex25], gi|116183288|...
 349.0 [0..1] [357..1]
AROB_DESRM - 3-dehydroquinate synthase OS=Desulfotomaculum reducens (strain MI-1) GN=aroB PE=3 SV=1
 349.0 [0..1] [356..1]
AROB_VIBPA - 3-dehydroquinate synthase OS=Vibrio parahaemolyticus GN=aroB PE=3 SV=1
AROB_VIBPA - 3-dehydroquinate synthase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=aroB PE...
 349.0 [0..1] [357..1]

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Predicted Domain #1
Region A:
Residues: [1-362] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERIVVTLGE RSYPITIASG LFNEPASFLP LKSGEQVMLV TNETLAPLYL DKVRGVLEQA  60
   61 GVNVDSVILP DGEQYKSLAV LDTVFTALLQ KPHGRDTTLV ALGGGVVGDL TGFAAASYQR 120
  121 GVRFIQVPTT LLSQVDSSVG GKTAVNHPLG KNMIGAFYQP ASVVVDLDCL KTLPPRELAS 180
  181 GLAEVIKYGI ILDGAFFNWL EENLDALLRL DGPAMAYCIR RCCELKAEVV AADERETGLR 240
  241 ALLNLGHTFG HAIEAEMGYG NWLHGEAVAA GMVMAARTSE RLGQFSSAET QRIITLLKRA 300
  301 GLPVNGPREM SAQAYLPHML RDKKVLAGEM RLILPLAIGK SEVRSGVSHE LVLNAIADCQ 360
  361 SA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.522879
Match: 1xagA
Description: CRYSTAL STRUCTURE OF STAPHLYOCOCCUS AUREUS 3-DEHYDROQUINATE SYNTHASE (DHQS) IN COMPLEX WITH ZN2+, NAD+ AND CARBAPHOSPHONATE
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle