| Protein: | APOC3_PIG |
| Organism: | Sus scrofa |
| Length: | 96 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APOC3_PIG.
| Description | E-value | Query Range |
Subject Range |
|
|
138.0 | [0..1] | [96..1] |
|
|
136.0 | [0..1] | [96..1] |
|
|
135.0 | [0..1] | [96..1] |
|
|
131.0 | [0..1] | [95..1] |
|
|
130.0 | [0..1] | [96..1] |
|
|
127.0 | [0..1] | [95..1] |
|
|
126.0 | [0..1] | [96..1] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MQPRVLLVAG LLVLLACAQA IEAEDTSLLD KMQDYVKQAT RTAQDALTSV KESEVAQQAR 60
61 GWVTDSISSL KDYWSTFKGK FTDFWDYTPK PEPSSS
|
| Detection Method: |  |
| Confidence: | 71.552842 |
| Match: | PF05778.3 |
| Description: | No description for PF05778.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.905 | N/A | N/A | a.7.16 | Description not found. |
| View | Download | 0.843 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.802 | N/A | N/A | a.29.16 | Description not found. |
| View | Download | 0.785 | N/A | N/A | a.249.1 | Description not found. |
| View | Download | 0.752 | N/A | N/A | a.7.16 | Description not found. |
| View | Download | 0.640 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.637 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.623 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
