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View Structure Prediction Details

Protein: ANDP_DROYA
Organism: Drosophila yakuba
Length: 60 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ANDP_DROYA.

Description E-value Query
Range
Subject
Range
gi|2582253 - gi|2582253|gb|AAB82485.1| Andropin [Drosophila melanogaster]
87.0 [0..1] [57..1]
gi|17298039 - gi|17298039|dbj|BAB78557.1| andropin [Drosophila yakuba]
86.0 [0..1] [57..1]
ANDP_DROTE - Andropin OS=Drosophila teissieri GN=Anp PE=2 SV=1
81.0 [0..1] [60..1]
ANDP_DROOR - Andropin OS=Drosophila orena GN=Anp PE=2 SV=1
77.0 [0..1] [60..1]
gi|17298017 - gi|17298017|dbj|BAB78546.1| andropin [Drosophila mauritiana]
73.0 [0..1] [57..1]
gi|17298013 - gi|17298013|dbj|BAB78544.1| andropin [Drosophila simulans]
73.0 [0..1] [60..1]
ANDP_DROSE - Andropin OS=Drosophila sechellia GN=Anp PE=2 SV=1
72.0 [0..1] [57..1]

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Predicted Domain #1
Region A:
Residues: [1-60]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYFSVLVVL TLILAISVGQ SNAIFVDVLD NVETALHNAA KAGFKLIKPI EKMIMPSKEK  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.731 a.112.1 Description not found.
View Download 0.731 a.177.1 Sigma2 domain of RNA polymerase sigma factors
View Download 0.716 a.16.1 S15/NS1 RNA-binding domain
View Download 0.696 a.112.1 Description not found.
View Download 0.696 a.177.1 Sigma2 domain of RNA polymerase sigma factors
View Download 0.655 a.74.1 Cyclin-like
View Download 0.655 a.74.1 Cyclin-like
View Download 0.591 a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.591 a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.523 a.16.1 S15/NS1 RNA-binding domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle