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View Structure Prediction Details

Protein: ANDP_DROMA
Organism: Drosophila mauritiana
Length: 57 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ANDP_DROMA.

Description E-value Query
Range
Subject
Range
gi|2582253 - gi|2582253|gb|AAB82485.1| Andropin [Drosophila melanogaster]
86.0 [0..1] [57..1]
gi|17298039 - gi|17298039|dbj|BAB78557.1| andropin [Drosophila yakuba]
84.0 [0..1] [57..1]
ANDP_DROTE - Andropin OS=Drosophila teissieri GN=Anp PE=2 SV=1
79.0 [0..1] [57..1]
ANDP_DROOR - Andropin OS=Drosophila orena GN=Anp PE=2 SV=1
74.0 [0..1] [56..1]
gi|17298017 - gi|17298017|dbj|BAB78546.1| andropin [Drosophila mauritiana]
73.0 [0..1] [57..1]
ANDP_DROSE - Andropin OS=Drosophila sechellia GN=Anp PE=2 SV=1
72.0 [0..1] [57..1]

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Predicted Domain #1
Region A:
Residues: [1-57]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYFVVLVVL ALILAITVGP SDAVFIDILD KMENAIHKAA QAGIGIAKPI EKMILPK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.756 a.16.1 S15/NS1 RNA-binding domain
View Download 0.661 a.177.1 Sigma2 domain of RNA polymerase sigma factors
View Download 0.661 a.112.1 Description not found.
View Download 0.625 a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.605 a.16.1 S15/NS1 RNA-binding domain
View Download 0.570 a.16.1 S15/NS1 RNA-binding domain
View Download 0.517 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.512 a.16.1 S15/NS1 RNA-binding domain
View Download 0.509 a.5.1 DNA helicase RuvA subunit, C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle