YRC Public Data Repository - Protein Structure Prediction

Protein:	AKH1_SCHNI
Organism:	Schistocerca nitens
Length:	63 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AKH1_SCHNI.

Description	E-value	Query Range	Subject Range
gi\|448528, gi\|74... - gi\|7428579\|pir\|\|AKLQS2 adipokinetic hormone II precursor - desert locust, gi\|448528\|prf\|\|1917247B ad...	89.0	[0..1]	[63..1]
AKH2_SCHNI - Adipokinetic prohormone type 2 OS=Schistocerca nitens PE=1 SV=1	87.0	[0..1]	[63..1]
gi\|81170844, gi\|... - gi\|91083865\|ref\|XP_974200.1\| PREDICTED: hypothetical protein [Tribolium castaneum], gi\|81170844\|gb\|A...	86.0	[0..2]	[61..1]
HTF_BLADI - Hypertrehalosaemic prohormone OS=Blaberus discoidalis PE=1 SV=1	85.0	[0..2]	[61..1]
gi\|55140543 - gi\|55140543\|gb\|AAV41425.1\| adipokinetic hormone preproprotein [Periplaneta americana]	84.0	[0..2]	[61..1]
AKH1_LOCMI - Adipokinetic prohormone type 1 OS=Locusta migratoria PE=1 SV=1	83.0	[0..1]	[63..1]
gi\|158299445, gi... - gi\|158299445\|ref\|XP_001689190.1\| AGAP008834-PB [Anopheles gambiae str. PEST], gi\|157013523\|gb\|EDO633... gi\|88595938 - gi\|88595938\|gb\|ABD43194.1\| adipokinetic hormone I preproprotein [Anopheles gambiae]	79.0	[0..6]	[62..6]
gi\|157131132, gi... - gi\|157131132\|ref\|XP_001655817.1\| hypothetical protein AaeL_AAEL011996 [Aedes aegypti], gi\|108871660\|...	77.0	[0..6]	[62..6]

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Predicted Domain #1

Region A:
Residues: [1-63]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQRCLVVAL LVVVVAAALC SAQLNFTPNW GTGKRDAGDY GDPYSFLYRL IQAEARKMSG  60
   61 CSN

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	52.0
Match:	PF06377.2
Description:	No description for PF06377.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits