YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: AHP4_ARATH
Organism: Arabidopsis thaliana
Length: 127 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AHP4_ARATH.

Description E-value Query
Range
Subject
Range
gi|115439883, gi... - gi|115439883|ref|NP_001044221.1| Os01g0743800 [Oryza sativa (japonica cultivar-group)], gi|113533752...
118.0 [0..10] [125..118]

Back

Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNIGKCMQG YLDEQFMELE ELQDDANPNF VEEVSALYFK DSARLINNID QALERGSFDF  60
   61 NRLDSYMHQF KGSSTSIGAS KVKAECTTFR EYCRAGNAEG CLRTFQQLKK EHSTLRKKLE 120
  121 HYFQASQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.154902
Match: 1yviA
Description: X-RAY STRUCTURE OF PUTATIVE HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN FROM RICE, AK104879
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle