| Protein: | AG43_ECOLI |
| Organism: | Escherichia coli |
| Length: | 1039 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AG43_ECOLI.
| Description | E-value | Query Range |
Subject Range |
|
|
368.0 | [0..1] | [1039..1] |
|
|
366.0 | [0..1] | [1039..53] |
|
|
356.0 | [0..1] | [1039..3] |
|
|
354.0 | [0..1] | [1039..53] |
|
|
354.0 | [0..1] | [1039..1] |
|
|
354.0 | [0..1] | [1039..3] |
|
|
354.0 | [0..1] | [1039..3] |
|
Region A: Residues: [1-177] |
1 11 21 31 41 51
| | | | | |
1 MKRHLNTCYR LVWNHMTGAF VVASELARAR GKRGGVAVAL SLAAVTSLPV LAADIVVHPG 60
61 ETVNGGTLAN HDNQIVFGTT NGMTISTGLE YGPDNEANTG GQWVQDGGTA NKTTVTSGGL 120
121 QRVNPGGSVS DTVISAGGGQ SLQGRAVNTT LNGGEQWMHE GAIATGTVIN DKGWQVV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [178-383] |
1 11 21 31 41 51
| | | | | |
1 KPGTVATDTV VNTGAEGGPD AENGDTGQFV RGDAVRTTIN KNGRQIVRAE GTANTTVVYA 60
61 GGDQTVHGHA LDTTLNGGYQ YVHNGGTASD TVVNSDGWQI VKNGGVAGNT TVNQKGRLQV 120
121 DAGGTATNVT LKQGGALVTS TAATVTGINR LGAFSVVEGK ADNVVLENGG RLDVLTGHTA 180
181 TNTRVDDGGT LDVRNGGTAT TVSMGN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [384-474] |
1 11 21 31 41 51
| | | | | |
1 GGVLLADSGA AVSGTRSDGK AFSIGGGQAD ALMLEKGSSF TLNAGDTATD TTVNGGLFTA 60
61 RGGTLAGTTT LNNGAILTLS GKTVNNDTLT I
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [475-559] |
1 11 21 31 41 51
| | | | | |
1 REGDALLQGG SLTGNGSVEK SGSGTLTVSN TTLTQKAVNL NEGTLTLNDS TVTTDVIAQR 60
61 GTALKLTGST VLNGAIDPTN VTLAS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [560-721] |
1 11 21 31 41 51
| | | | | |
1 GATWNIPDNA TVQSVVDDLS HAGQIHFTST RTGKFVPATL KVKNLNGQNG TISLRVRPDM 60
61 AQNNADRLVI DGGRATGKTI LNLVNAGNSA SGLATSGKGI QVVEAINGAT TEEGAFVQGN 120
121 RLQAGAFNYS LNRDSDESWY LRSENAYRAE VPLYASMLTQ AM
|
| Detection Method: | |
| Confidence: | 5.744727 |
| Match: | PF03212.5 |
| Description: | No description for PF03212.5 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [722-1039] |
1 11 21 31 41 51
| | | | | |
1 DYDRIVAGSR SHQTGVNGEN NSVRLSIQGG HLGHDNNGGI ARGATPESSG SYGFVRLEGD 60
61 LMRTEVAGMS VTAGVYGAAG HSSVDVKDDD GSRAGTVRDD AGSLGGYLNL VHTSSGLWAD 120
121 IVAQGTRHSM KASSDNNDFR ARGWGWLGSL ETGLPFSITD NLMLEPQLQY TWQGLSLDDG 180
181 KDNAGYVKFG HGSAQHVRAG FRLGSHNDMT FGEGTSSRAP LRDSAKHSVS ELPVNWWVQP 240
241 SVIRTFSSRG DMRVGTSTAG SGMTFSPSQN GTSLDLQAGL EARVRENITL GVQAGYAHSV 300
301 SGSSAEGYNG QATLNVTF
|
| Detection Method: | |
| Confidence: | 4.53 |
| Match: | 1uynX |
| Description: | Translocator domain of autotransporter NalP from Neisseria meningitidis |
Matching Structure (courtesy of the PDB): |
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