YRC Public Data Repository - Protein Structure Prediction

Protein:	ACYP2_PIG, ACYM_PIG
Organism:	Sus scrofa
Length:	98 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACYP2_PIG, ACYM_PIG.

Description	E-value	Query Range	Subject Range
gi\|109501088, gi... - gi\|149044859\|gb\|EDL98045.1\| rCG23240 [Rattus norvegicus], gi\|109501088\|ref\|XP_001059111.1\| PREDICTED...	132.0	[0..1]	[98..27]
ACYP2_MOUSE - Acylphosphatase-2 OS=Mus musculus GN=Acyp2 PE=1 SV=2	127.0	[0..1]	[98..9]
gi\|90079091 - gi\|90079091\|dbj\|BAE89225.1\| unnamed protein product [Macaca fascicularis] gi\|109102938 - gi\|109102938\|ref\|XP_001114543.1\| PREDICTED: similar to muscle-type acylphosphatase 2 [Macaca mulatta...	127.0	[0..1]	[98..30]
ACYP2_PIG - Acylphosphatase-2 OS=Sus scrofa GN=ACYP2 PE=1 SV=2	125.0	[0..1]	[98..2]
ACYP2_RABIT - Acylphosphatase-2 OS=Oryctolagus cuniculus GN=ACYP2 PE=1 SV=2	124.0	[0..1]	[98..2]
gi\|73970158 - gi\|73970158\|ref\|XP_531824.2\| PREDICTED: similar to muscle-type acylphosphatase 2 [Canis familiaris]	124.0	[0..1]	[98..31]

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Predicted Domain #1

Region A:
Residues: [1-98]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STARPLKSVD YEVFGRVQGV CFRMYTEDEA RKIGVVGWVK NTSKGTVTGQ VQGPEEKVNS  60
   61 MKSWLSKIGS PSSRIDRTNF SNEKTISKLE YSNFSIRY

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	28.221849
Match:	1apsA
Description:	THREE-DIMENSIONAL STRUCTURE OF ACYLPHOSPHATASE. REFINEMENT AND STRUCTURE ANALYSIS
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.14991565197115	bayes_pls_golite062009
binding	0.631839068837998	bayes_pls_golite062009
hydrolase activity	0.17963476223629	bayes_pls_golite062009
protein binding	0.0854117951018196	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: