YRC Public Data Repository - Protein Structure Prediction

Protein:	ACSA2_PSEAE, ACS...
Organism:	Pseudomonas aeruginosa
Length:	645 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACSA2_PSEAE, ACS....

Description	E-value	Query Range	Subject Range
ACSA_HALHL - Acetyl-coenzyme A synthetase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=acsA PE=3 SV=1	0.0	[1..645]	[1..645]
gi\|194549515, gi... - gi\|84317386\|ref\|ZP_00965834.1\| COG0365: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Pseudo... gi\|194555350, gi... - gi\|84323610\|ref\|ZP_00971679.1\| COG0365: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Pseudo... gi\|107103832 - gi\|107103832\|ref\|ZP_01367750.1\| hypothetical protein PaerPA_01004903 [Pseudomonas aeruginosa PACS2]	0.0	[1..645]	[1..645]
gi\|116052880, gi... - gi\|32044073\|ref\|ZP_00141174.1\| COG0365: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Pseudo...	0.0	[1..645]	[1..645]
gi\|152983978, gi... - gi\|94417349\|ref\|ZP_01297167.1\| hypothetical protein PaerP_01000666 [Pseudomonas aeruginosa PA7], gi\|...	0.0	[1..645]	[1..645]
ACSA_ALKEH - Acetyl-coenzyme A synthetase OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1...	0.0	[1..645]	[1..645]
sp\|A0L576\|ACSA_MAGMM - Acetyl-coenzyme A synthetase OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) GN=a... ACSA_MAGMM - Acetyl-coenzyme A synthetase OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) GN=a...	0.0	[1..641]	[1..641]
gi\|48763827 - ref\|ZP_00268380.1\| COG0365: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Rhodospirillum rub... gi\|83577818, gi\|... - gi\|83594904\|ref\|YP_428656.1\| acetyl-coenzyme A synthetase [Rhodospirillum rubrum ATCC 11170], gi\|835...	0.0	[1..642]	[1..643]
gi\|77461035, gi\|... - gi\|77461035\|ref\|YP_350542.1\| acetyl-CoA synthetase [Pseudomonas fluorescens Pf0-1], gi\|77385038\|gb\|A...	0.0	[1..645]	[1..645]
gi\|67158691, gi\|... - gi\|67158691\|ref\|ZP_00419552.1\| AMP-dependent synthetase and ligase [Azotobacter vinelandii AvOP], re... gi\|67158691, gi\|... - gi\|67158691\|ref\|ZP_00419552.1\| AMP-dependent synthetase and ligase [Azotobacter vinelandii AvOP], gi...	0.0	[1..643]	[1..643]
ACSA_SYNFM - Acetyl-coenzyme A synthetase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=acsA PE=3 ...	0.0	[6..643]	[5..642]

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Predicted Domain #1

Region A:
Residues: [1-645]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFEISVHPVP DAVRQRAYLN DDDYQRLYRQ SVENPDEFWG EQAKAFLDWF KPWHSVHHGD  60
   61 LRKGQATWFK GGQLNVAYNC IDRHLERRGE QIAIVWEGDN PSESAHITYR KLHHNVCRLA 120
  121 NVLKSRGVEK GDRVCIYMPM IPEAAYAMLA CARIGAVHSV VFGGFSPDSL RDRILDADCR 180
  181 TVITADEGVR GGKYIPLKQN VEKALKDCPD VSTVVVVERT QGDIPWVEGR DIWYHEALHA 240
  241 ASADCPAEAM DAEDPLFILY TSGSTGKPKG VLHTTGGYLL GAAMTHKYVF DYHDGDVYWC 300
  301 TADVGWVTGH SYIVYGPLAN GATTLMFEGV PNYPDASRFW QVIDKHQVNI FYTAPTAIRA 360
  361 LMREGDAPVR QTSRSSLRLL GSVGEPINPE AWEWYYQVVG EKRCPILDTW WQTETGSILI 420
  421 TPLPGATALK PGSATRPFFG VQPVLLDEKG KEIDGAGSGV LAIKASWPSQ IRSVYGDHQR 480
  481 MIDTYFKPYP GYYFSGDGAR RDEDGYYWIT GRVDDVINVS GHRIGTAEVE SALVLHDAVA 540
  541 EAAVVGCPHD VKGQAIYAFV TLMAGSQPSE ALQQELLALV GKEIGSFAKP DHLQWAPSLP 600
  601 KTRSGKIMRR ILRKIACNEL DSLGDTSTLA DPGVVQGLID NRLNR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	1000.0
Match:	2p2bA
Description:	No description for 2p2bA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits