YRC Public Data Repository - Protein Structure Prediction

Protein:	ACP_ECOLI
Organism:	Escherichia coli
Length:	77 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACP_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|58580505, gi\|... - gi\|58580505\|ref\|YP_199521.1\| acyl carrier protein [Xanthomonas oryzae pv. oryzae KACC10331], gi\|5842...	95.0	[0..1]	[76..62]
ACP_AQUAE - Acyl carrier protein OS=Aquifex aeolicus (strain VF5) GN=acpP PE=1 SV=1 ACP_AQUAE - Acyl carrier protein OS=Aquifex aeolicus GN=acpP PE=1 SV=1	91.0	[0..2]	[77..2]
gi\|221481756 - gi\|221481756\|gb\|EEE20132.1\| acyl carrier protein, putative [Toxoplasma gondii GT1] gi\|237832401, gi... - gi\|237832401\|ref\|XP_002365498.1\| acyl carrier protein [Toxoplasma gondii ME49], gi\|211963162\|gb\|EEA9... gi\|3746415, gi\|3... - gi\|3746421\|gb\|AAC63956.1\| acyl carrier protein precursor [Toxoplasma gondii], gi\|3746415\|gb\|AAC63953... gi\|221502190 - gi\|221502190\|gb\|EEE27928.1\| acyl carrier protein, putative [Toxoplasma gondii VEG]	91.0	[0..3]	[77..106]
gi\|69134791, gi\|... - gi\|69298444\|ref\|ZP_00620724.1\| Acyl carrier protein (ACP) [Silicibacter sp. TM1040], gi\|69134791\|gb\|...	90.0	[0..1]	[74..76]
gi\|20807918 - gi\|20807918\|ref\|NP_623089.1\| Acyl carrier protein [Thermoanaerobacter tengcongensis MB4] gi\|20807918, gi\|... - gi\|20807918\|ref\|NP_623089.1\| Acyl carrier protein [Thermoanaerobacter tengcongensis MB4], gi\|2051648...	90.0	[0..3]	[74..25]
gi\|50084083, gi\|... - gi\|50084083\|ref\|YP_045593.1\| acyl carrier protein (ACP) [Acinetobacter sp. ADP1], gi\|49530059\|emb\|CA...	90.0	[0..1]	[77..38]
gi\|111226160, gi... - gi\|111226160\|ref\|YP_716954.1\| acyl carrier protein (partial match) [Frankia alni ACN14a], gi\|1111536...	89.0	[0..1]	[75..185]
gi\|77024123\|gb\|A... - chloroplast acyl carrier protein [Karlodinium micrum] gi\|77024123 - gi\|77024123\|gb\|ABA55532.1\| chloroplast acyl carrier protein [Karlodinium micrum]	89.0	[0..2]	[76..61]
gi\|33574257 - gi\|33574257\|emb\|CAE38589.1\| acyl carrier protein [Bordetella parapertussis] gi\|33597828 - gi\|33597828\|ref\|NP_885471.1\| acyl carrier protein [Bordetella parapertussis 12822]	88.0	[0..2]	[75..22]
gi\|34498868, gi\|... - gi\|34498868\|ref\|NP_903083.1\| acyl carrier protein [Chromobacterium violaceum ATCC 12472], gi\|3410472...	88.0	[0..2]	[76..15]

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Predicted Domain #1

Region A:
Residues: [1-77]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STIEERVKKI IGEQLGVKQE EVTNNASFVE DLGADSLDTV ELVMALEEEF DTEIPDEEAE  60
   61 KITTVQAAID YINGHQA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	19.09691
Match:	2ehsA
Description:	No description for 2ehsA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits