YRC Public Data Repository - Protein Structure Prediction

Protein:	ANFC4_ORYLA
Organism:	Oryzias latipes
Length:	121 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ANFC4_ORYLA.

Description	E-value	Query Range	Subject Range
ANFD_LITCT - C-type natriuretic peptide 2 OS=Lithobates catesbeiana PE=3 SV=1	127.0	[0..1]	[121..1]
ANFC4_TAKRU - C-type natriuretic peptide 4 OS=Takifugu rubripes GN=cnp-4 PE=2 SV=1	116.0	[0..1]	[121..1]
gi\|90652774 - gi\|90652774\|dbj\|BAE92277.1\| C-type natriuretic peptide 4 [Polypterus endlicheri]	114.0	[0..1]	[121..1]
gi\|68438345 - gi\|68438345\|ref\|XP_698794.1\| PREDICTED: similar to C-type natriuretic peptide-4 [Danio rerio]	112.0	[0..16]	[121..634]
ANF_RAT - Natriuretic peptides A OS=Rattus norvegicus GN=Nppa PE=1 SV=1	109.0	[0..8]	[121..10]
gi\|108246 - pir\|\|S13107 atrial natriuretic peptide precursor - pig ANF_PIG - Natriuretic peptides A OS=Sus scrofa GN=NPPA PE=1 SV=1	107.0	[0..3]	[121..5]
gi\|18254389 - gi\|18254389\|gb\|AAL66741.1\|AF460238_1 atrial natriuretic peptide hormone [Notomys alexis]	107.0	[0..3]	[121..5]
ANF_MOUSE - Natriuretic peptides A OS=Mus musculus GN=Nppa PE=1 SV=2	105.0	[0..3]	[121..5]
ANF_FELCA - Natriuretic peptides A OS=Felis catus GN=NPPA PE=3 SV=1	105.0	[0..2]	[121..5]

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Predicted Domain #1

Region A:
Residues: [1-121]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLSYLVACG LLVTFLSDKM DAQPLTPAQQ KSLRSLLGEE LAEFLESGEN ENRLDDVRSR  60
   61 MRLLRDLRVD TRARGMWARL LNDQPASRRH KSGSKKGGST SRSGCFGHKM DRIGTISGMG 120
  121 C

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	17.568636
Match:	PF00212.9
Description:	No description for PF00212.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term	Confidence	Notes
binding	1.3019741467601	bayes_pls_golite062009
protein binding	1.26012288605031	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: