YRC Public Data Repository - Protein Structure Prediction

Protein:	ACBP_ANAPL
Organism:	Anas platyrhynchos
Length:	103 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACBP_ANAPL.

Description	E-value	Query Range	Subject Range
gi\|12052810 - gi\|12052810\|emb\|CAB66577.1\| hypothetical protein [Homo sapiens]	132.0	[0..1]	[100..26]
gi\|73949054 - gi\|73949054\|ref\|XP_848899.1\| PREDICTED: similar to Acyl-CoA-binding protein (ACBP) (Diazepam binding...	127.0	[0..17]	[103..212]
gi\|26364942 - gi\|26364942\|dbj\|BAB26315.2\| unnamed protein product [Mus musculus]	126.0	[0..1]	[94..24]
gi\|109069481 - gi\|109069481\|ref\|XP_001094776.1\| PREDICTED: similar to peroxisomal D3,D2-enoyl-CoA isomerase isoform...	126.0	[0..1]	[94..24]
ACBD5_PONPY - Acyl-CoA-binding domain-containing protein 5 - Pongo pygmaeus (Orangutan) ACBD5_PONAB - Acyl-CoA-binding domain-containing protein 5 OS=Pongo abelii GN=ACBD5 PE=2 SV=1	124.0	[0..11]	[103..36]
gi\|109505315 - gi\|109505315\|ref\|XP_225630.4\| PREDICTED: similar to acyl-Coenzyme A binding domain containing 5 [Rat...	124.0	[0..11]	[103..271]

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Predicted Domain #1

Region A:
Residues: [1-103]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQAHLLRGT LTLSFFLHQA DFDEAAEEVK KLKTRPTDEE LKELYGFYKQ ATVGDINIEC  60
   61 PGMLDLKGKA KWEAWNLKKG ISKEDAMNAY ISKAKTMVEK YGI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	27.69897
Match:	2cb8A
Description:	No description for 2cb8A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits