YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|37813683, gi\|...
Organism:	Drosophila melanogaster
Length:	55 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|37813683, gi|....

Description	E-value	Query Range	Subject Range
gi\|1083945, gi\|7... - gi\|7548732\|gb\|AAB27872.2\| sex-peptide; SP [Drosophila suzukii], pir\|\|A56547 sex-peptide precursor - ...	84.0	[0..1]	[55..1]
A70A_DROSE - Accessory gland-specific peptide 70A OS=Drosophila sechellia GN=Acp70A PE=2 SV=1	69.0	[0..18]	[55..18]
A70A_DROMA - Accessory gland-specific peptide 70A OS=Drosophila mauritiana GN=Acp70A PE=2 SV=1 A70A_DROSI - Accessory gland-specific peptide 70A OS=Drosophila simulans GN=Acp70A PE=2 SV=1	69.0	[0..18]	[55..18]
Acp70A-PA - The gene Accessory gland peptide 70A is referred to in FlyBase by the symbol Dmel\Acp70A (CG17673, F...	69.0	[0..18]	[55..18]

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Predicted Domain #1

Region A:
Residues: [1-55]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLALFLVL VCVLGLVQSW EWPWNRKPTK FPIPSPNPRD KWCRLNLGPA WGGRC

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	30.107905
Match:	PF08138.2
Description:	No description for PF08138.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits