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View Structure Prediction Details

Protein: glb-1
Organism: Caenorhabditis elegans
Length: 159 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for glb-1.

Description E-value Query
Range
Subject
Range
gi|73988393 - gi|73988393|ref|XP_542374.2| PREDICTED: similar to Hemoglobin epsilon chain [Canis familiaris]
158.0 [0..1] [151..45]

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Predicted Domain #1
Region A:
Residues: [1-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMNRQEISD LCVKSLEGRM VGTEAQNIEN GNAFYRYFFT NFPDLRVYFK GAEKYTADDV  60
   61 KKSERFDKQG QRILLACHLL ANVYTNEEVF KGYVRETINR HRIYKMDPAL WMAFFTVFTG 120
  121 YLESVGCLND QQKAAWMALG KEFNAESQTH LKNSNLPHV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.69897
Match: 1ashA
Description: THE STRUCTURE OF ASCARIS HEMOGLOBIN DOMAIN I AT 2.2 ANGSTROMS RESOLUTION: MOLECULAR FEATURES OF OXYGEN AVIDITY
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle