| Protein: | zyg-12 |
| Organism: | Caenorhabditis elegans |
| Length: | 761 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for zyg-12.
| Description | E-value | Query Range |
Subject Range |
|
|
237.0 | [0..10] | [685..2251] |
|
Region A: Residues: [1-188] |
1 11 21 31 41 51
| | | | | |
1 MLDLTNKESE SSDNGNSKYE DSIDGREVGT SKPFKEERSL EDLQADLADM AVWMEGLDAT 60
61 KLPLNDPQLL CNGRAFSEVL HNVDKNFFTD GWLETMPENR TTNIMVFRSC TRKLWRKMFD 120
121 YVNHINRTVV SSRWTDIHER IDGIYESDLP AMVNLGMAVV TLAHIGKNAK RFVDYSKALT 180
181 STHKSMMS
|
| Detection Method: |  |
| Confidence: | 17.0 |
| Match: | 1wixA |
| Description: | The solution structure of RSGI RUH-026, conserved domain of HOOK1 protein from mouse |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.77302826695282 | bayes_pls_golite062009 |
| protein binding | 1.34258839710246 | bayes_pls_golite062009 |
| microtubule binding | 0.26034159312323 | bayes_pls_golite062009 |
| tubulin binding | 0.11464228697646 | bayes_pls_golite062009 |
|
Region A: Residues: [189-277] |
1 11 21 31 41 51
| | | | | |
1 NVAKMVTTVI DEMPENPCFH EISELHGSQS ELNSLSESSG KLNGNGSSER RSNADQILVD 60
61 AELEIERLRT ETENQRKEIE RLTKSFETA
|
| Detection Method: | |
| Confidence: | 3.30103 |
| Match: | 2fxmA |
| Description: | No description for 2fxmA was found. |
|
Region A: Residues: [278-417] |
1 11 21 31 41 51
| | | | | |
1 QHDMSSNSES GDISILEKQN EELRQKRREL EEKNLELDAA VDQFKGIVFE LTNENDVLRR 60
61 SDKERQRLQT VLDAAQSDLD EWKTVANQYQ KEAELSKQQD KEIKELLSQN KALKSRLDHH 120
121 VKSATLEDAN KNGIAQLRTQ
|
| Detection Method: | |
| Confidence: | 1.74 |
| Match: | 1jchA |
| Description: | Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [418-761] |
1 11 21 31 41 51
| | | | | |
1 VGGLTALNTE LKASLDSKKR CVEQLEIQLI QHKEKVKELE DRKDELIEER NRLENQLIFK 60
61 EAVTPRSLHE SMFEAGNLSF EPFSEKNTLP LEIENKRLTE RIQELESLEP LKGELITLKS 120
121 KNGVLEEEKL FATKQIEELQ QQIEDLQENL LKNQEHASGD VVGLKIQLEK AEVEAQQMRE 180
181 AKMRAETNQA QVDEILKKRT AELEVNATAL QKAKAVIDEL EYNSRPVSED SMTSVQAFKE 240
241 MKEENEKLRQ KVEKLEIELN TVTQGFEQEN RLLTSASHQQ VLNRSIDEVM SMRAHAGSEE 300
301 PQTLLDTQKM SGALPWSILV LGFLVFIAWM FININSALNA PPNA
|
| Detection Method: | |
| Confidence: | 14.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
