| Protein: | wrt-6 |
| Organism: | Caenorhabditis elegans |
| Length: | 593 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for wrt-6.
| Description | E-value | Query Range |
Subject Range |
|
|
444.0 | [0..2] | [593..3] |
|
Region A: Residues: [1-191] |
1 11 21 31 41 51
| | | | | |
1 MTLLNLFYCF CLLFGAVLAD SIHDGGSCGT NSIPYKMEVD SEGKPVISCE APSCLGVSSS 60
61 AARRPRVLDV SCDPFKEIVC VKDLQWTSGL VEINNGTHRT LKTECCSYEG MSDAKTIKSI 120
121 FLGPGQSFVG GMVEKDGEQS GFDLIKEIRK TVNADNQVQY IVGVYRMPCE ATSDSSEEAL 180
181 PLLSRNRRKL R
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [192-368] |
1 11 21 31 41 51
| | | | | |
1 DRVGKYDDYE EDRNYRSERR RPFAMRRRAL LQRLEDMYDD YDYEFRVVRR PFRKSRLPYN 60
61 ENALWPLQYS SPQRSRTFAD NTYNKETVES GPLPPPPSSN YIDNVAPASP VVQSPAYPQT 120
121 PAEMPLPPQS GSYSGSYSGY PTADASQYNA YPAMQQPAYQ PAYQPAYQPA YQPAYQP
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [369-593] |
1 11 21 31 41 51
| | | | | |
1 AYQPAYSARG YSPNLNGLFG GTGMQCFSGD MEVETEDGIK MIKDLKIGDK VLSMDEAFVT 60
61 YSPVIMFLHK RDEEIAEFNL IETANGHSIK LTDNHLIYVS DCRTRSDLKL VAAKEVKMDD 120
121 CIHVTTDSNV VIKKKVSKIS KVIETGIYSP LTSTGDIIVN RVLASCHSNL ALKSLQQTFF 180
181 SLYKRTSSVF HNLMFFKSST EEGDLPVGVE TLTSVMDLFI PQSFV
|
| Detection Method: | |
| Confidence: | 35.522879 |
| Match: | 1at0A |
| Description: | 17-KDA FRAGMENT OF HEDGEHOG C-TERMINAL AUTOPROCESSING DOMAIN |
Matching Structure (courtesy of the PDB): |
|
