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View Structure Prediction Details

Protein: CE37300
Organism: Caenorhabditis elegans
Length: 577 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37300.

Description E-value Query
Range
Subject
Range
CE34430 - status:Confirmed UniProt:Q9N4B6 protein_id:AAF36077.2
1108.0 [0..1] [577..1]

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Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METRKVRTPS AKLLAAKQDE VFEKVIPTAQ LTPKSTISAQ MAKVPESTTP EPLSVDQERD  60
   61 MTPDASVLDD HMDTQTMEIE MEMALKREKI DAQMVLNSDF SVANEVTISS MKYQGRPTPT 120
  121 RKRVAAATSF TGETLNLKSS DLSI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [145-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PNKAAHFLYF RCYEEHEVQK EFPLTIDETR KGPQNFLVEP RHGLKNTDYY IDSYLWNRGK  60
   61 STSSKKKIFV EIEGNHVKTS RRTAETAHYV LNWYYSNMEN RICKKVCWLE SLVDNSRASP 120
  121 VLVQYHVNYL SDNPIELRKT PKLYSDTRSV AQELLRSDSP LQTVQRFVET GETDPREIIN 180
  181 KKQAYEMRRY VMANARKRMH RRMDDN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [351-577]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVYYDDEMFE EVYYNEPDSL LNPPRHNGGD AARVAQMVCR QMGRRIENRI ASMLDSRLGP  60
   61 PKNHAEMLTE WMNTLMGSTS EDYDIVIHNV VNSMKKQLDE MLGEPPQHHT EYMDEAGGPS 120
  121 STSSMKRMKM MNSHGAAEDD EDDDDGGHHH VVGNSGKPRF EGERYIFDGE EYVEEEVIAE 180
  181 ELTEVPASSA NGEQSDDVKY NERGAQAAAF FFRQATEGVA HVETVDQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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