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View Structure Prediction Details

Protein: CE36758
Organism: Caenorhabditis elegans
Length: 438 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36758.

Description E-value Query
Range
Subject
Range
FLNC_RAT - Filamin-C OS=Rattus norvegicus GN=Flnc PE=1 SV=1
432.0 [0..1] [438..1305]

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Predicted Domain #1
Region A:
Residues: [1-53]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKINPDGTYS TDTPLMEVGE HKLQLLFDEI PVKEAVVEVI KGTDVNKCKA YGP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [54-352]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLEQAVVGEK AVFELDLDGA GEGALSMEMR GPAKAESRIQ DRGNGKCSVE YVAKAPGDYE  60
   61 MAIKFGKDEQ KEHVKGSPFK AVVDYKKDPS QITISGLDQP NYRLNQPINF VIDTSKTKDL 120
  121 PVKATVPSDF AQLQPVVSRS PSNPRHHNVR FVPSGKPNVS IPIEIIYDGL KIDEKLVKVL 180
  181 PEVEPQLIKI LHDKKKDSLT TTPITTNASH EGHVPFDVRD CGNVKKIESR VFGPDGKERL 240
  241 NHVRSTEQNG IYDVSFPTDM AGEYCVVFYI NGQEVAARVP VMAEKIGRKE DVIKEEIVF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.522879
Match: 2j3sA
Description: No description for 2j3sA was found.

Predicted Domain #3
Region A:
Residues: [353-438]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HPEIAEHSPT VLTYNHPIDA KKKKAHPAIQ VLAAKPDAVR LEHIQELVDN GHRVADRIVF  60
   61 TATKLGTNTL DVFYGGEHVD HVEYEV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.045757
Match: 2dmbA
Description: No description for 2dmbA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle