| Protein: | CE36458 |
| Organism: | Caenorhabditis elegans |
| Length: | 512 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36458.
| Description | E-value | Query Range |
Subject Range |
|
|
311.0 | [0..97] | [509..13] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MSHQASHFGV KKKWKANGSS GGGGLSAFAR MKPVLDPSAD RIWTIGQIIY QRHQAFNRNS 60
61 AIKSQDNGSF DYIDMVSQSS LDRSTE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [87-512] |
1 11 21 31 41 51
| | | | | |
1 EERRTVQTDD VAEIGMQRPD YQMYCGEEEI SEQFVKLNVG GQRFMLRKDT IRRRGVGRLL 60
61 DLINKPVADS NADAFFSSTS EFYFERPPSL FHIVYQFYLN GVIHQPSNLC PVDIIEELEY 120
121 WRIIPDQYLA SCCCAQQIDD DDEEVEEQDK PNLFKTLRFG EIRRCVWNII EEPASSGKAQ 180
181 AFAVCSVVFV LISISGLVLG SLPELQVATK QRNNLTGEEF TEMEPMPILG YIEYVCIVWF 240
241 TMEYGLKMLV SAERSKTFRQ LLNIIDLLAI LPFIIEMLLL IFGISTEQLR DLKGAFLVIR 300
301 ILRVLRVIRV LKLGRYSSGL QMFGKTLKAS FRQLGMMAMV VMTGVIFFST LVYFLEKDEP 360
361 ASKFHSIPAA CWWCIVTMTT VGYGDLTPVT VPGKLVATGA IAGGNRYRTS QYPKATKSEQ 420
421 MILKVT
|
| Detection Method: | |
| Confidence: | 76.0 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
