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View Structure Prediction Details

Protein: CE37167
Organism: Caenorhabditis elegans
Length: 406 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37167.

Description E-value Query
Range
Subject
Range
gi|94406757 - gi|94406757|ref|XP_981969.1| PREDICTED: similar to mortality factor 4 like 1 isoform b [Mus musculus...
179.0 [0..1] [264..1]

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Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPNRTPKQN FAIGEDITCV YKTHPYDATI IGIENNREGK ECYCVHFKGW NCRYDEKIVI  60
   61 GEEKDRIFKG TVEDYYKKSH KTVVTAVVAG KQKQTASSSA DSNGTSSGAT EKAAKAPAAT 120
  121 MRKSAKKVGE SNSEATDPEA KAKE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.0
Match: 2f5kA
Description: No description for 2f5kA was found.

Predicted functions:

Term Confidence Notes
binding 0.374364652893655 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [145-406]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSQSALKVEP PLTTHNSSRK TVEATGAMKR LTVAKETEDE ALKSQKKARI EPVEDASKAK  60
   61 GSAAPKSASS RAEDGESSST NDAAGTRFVI GELVACTYKG KVYDAVITDI KPDKDGKECY 120
  121 CIHFKGWNNR YDEQIPIGEE TDRIFKGIAD GYRAPVVTMR KSARNHEKST EPQATKENAP 180
  181 RLVGKRREQF IIGEQVTCTQ NGKPYDAYIV DIITDTDGKD FYCVHFKGWN SRYDEKIPVG 240
  241 EEQGRLFKGS AAKYAEMLEM KK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.30103
Match: 2pqwA
Description: No description for 2pqwA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle