| Protein: | gck-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 638 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gck-1.
| Description | E-value | Query Range |
Subject Range |
|
|
399.0 | [0..10] | [638..25] |
|
Region A: Residues: [1-316] |
1 11 21 31 41 51
| | | | | |
1 MDFTNFGSEI EKLDPEVIFT KQERIGRGSF GEVYKGIDNR TGRVVAIKII DLEQAEDEIE 60
61 DIQQEIQVLS QCDSQYVTKY FGSFLKGSKL WIIMEYLGGG SALDLTKSGK LDESHIAVIL 120
121 REILKGLEYL HSERKIHRDI KAANVLVSEH GDVKVADFGV AGQLTETVKK RITFVGSPFW 180
181 MAPELIKQSS YDYKADIWSL GITAIELANG EPPHSDLHPM RVLFLIPKNP PPVLQGSQWS 240
241 KPFKEFVEMC LNKDPENRPS ASTLLKHQFI KRAKKNSILV DLIERAAEYR LRTGVSSDSD 300
301 LDEDSDGGGG TSKWDY
|
| Detection Method: |  |
| Confidence: | 66.221849 |
| Match: | 1f3mC |
| Description: | pak1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [317-638] |
1 11 21 31 41 51
| | | | | |
1 PTVRGPRVSA DDDGTVRQRT DRPRAQVDRR SPSGSPGGTI VRGSPQVAAV AEQLRNSSVG 60
61 SSGYGSGGNS ASSQYATSSL PQSHTASSGG ATTITLGSPN GSPTSSLART QSMVSPSGQR 120
121 SGSAQSWELE RGNRPMSERV SSQVSPSKYN QHRTSSSNGV QGGSGGRREY INGSGSGLNG 180
181 NSSNQNHSEY SDAVRQRGPG GSGGRLDYRE SHVPTSSQEN LNHGRMYGYG APPPSREANN 240
241 VPMPRVKGAL DCSLLPAIEH LSRTRHATAA LDQLRHVFRD VEDSCPGICN ELIEELMQRI 300
301 AVPQVSQSDL DAAIRRLTTP PS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
