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View Structure Prediction Details

Protein: inx-10
Organism: Caenorhabditis elegans
Length: 492 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-10.

Description E-value Query
Range
Subject
Range
inx-10 - type-1 membrane protein status:Partially_confirmed UniProt:Q22549 protein_id:AAA83332.1
606.0 [0..1] [486..1]

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Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLAAVLSML RYVGGSDDRD FVDRLHSYFT CNLLIGLAVL VSFKQFGGKP VECLVPDIFS  60
   61 SSWEQYAENY CWASDTYYVP TNEPVAGLQS DEKRQRKISY YQWVPFFLLL EAACFRLPSL 120
  121 LWKYL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [126-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGHSGIKINE IVKLSSDPNN IKPDIKRANI KSLTVHLQGA LRFHRRLQKK QIRPHRFLWL  60
   61 FNLPYSAFFV TAMYLCTKFF YLANVCLQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [214-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LMFMNRFLET DKYKWYGMGA LVDLLNGTTW EQSGMFPRVS LCDFDVRVMG NMQEHTIQCV  60
   61 LVINIFNEKI FILLWFWYLA LLVFTFGSFF YWLLVSLWRH LNVRFIIRHL EMSDIAFDSS 120
  121 EDGAQEKVNR FISNYLKSDG VFVIRMMTLQ SGVIFGTDLV QELWRNFHGS EPQLKRSNSA 180
  181 PKIE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [398-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EREQWWPAYP SLVNPINPWR YRDENQANAL RWRRALGANV DNSIATQDLM EKLLPQNAHM  60
   61 RPSDDELLRM SVVAFDKDHH DNRINNDNQC KKGMK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle