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View Structure Prediction Details

Protein: CE37272
Organism: Caenorhabditis elegans
Length: 641 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37272.

Description E-value Query
Range
Subject
Range
gi|68368751 - gi|68368751|ref|XP_684042.1| PREDICTED: similar to Aminopeptidase puromycin sensitive [Danio rerio]
517.0 [0..2] [641..267]

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Predicted Domain #1
Region A:
Residues: [1-641]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSSFFLVLL LFQTANSWPH NIIPLSYDLL FKLPIHEFNG FTGSMVLHFN LSSLSDNITL  60
   61 DAVDLHSFRN ISLIRSADLT EPTLKSIKIL KEKVELKFEK SLFPGQYLLT IGEYNGRIGN 120
  121 SSEALFERRN PLLYTTHLQP NHARRLFPCI DHPAVKALFR LSIVHPTDTV AQSNTIAMDV 180
  181 HVENRKWQRT IFQATPLLPA YLVAFSVMPD SNLQLSRQTS FGVTVRVNGE SRGLVLRVLD 240
  241 CALASFEILA GLIDVPLPLN KIDFILVPEY DGGMENWGHI TVSETLATSG DDAHLIYLIA 300
  301 HEIAHHWIGN RATIDSWNWI CLQEDLTDWM ALKAVKALLT DEIRLQRFQL AQYVEIQLVE 360
  361 DFLSPGHSLY MPSKINQELI NRHCYLKGVV LLDTLESVVG EQFMYSVIKS LVGSHSTYNL 420
  421 TTFTSYFDQI RVDRNATVGQ IYEYWYTTGG YPSILVENNG PSSRLQQLSR PLWPLKMTST 480
  481 LAIPQFVFSE SIVFASENAP LLVNLNFTSF MRVNYDSLTW TAIFKYMFEE PELFSAVGRA 540
  541 QLVSDFCYFY ANDKVDNGTI LKEAVVDMVY SKPEFFELCD WNLYWCHSRS DQSLFAQVVR 600
  601 SLALRFSSAT FESTSAFGCK NGMAARSMNQ FCERIFGRKC I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 110.0
Match: 1z1wA
Description: Crystal structures of the tricorn interacting facor F3 from Thermoplasma acidophilum, a zinc aminopeptidase in three different conformations
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle