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View Structure Prediction Details

Protein: acbp-5
Organism: Caenorhabditis elegans
Length: 274 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acbp-5.

Description E-value Query
Range
Subject
Range
gi|115951940 - gi|115951940|ref|XP_001184381.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpura...
354.0 [0..5] [272..84]

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Predicted Domain #1
Region A:
Residues: [1-274]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIAWAVSSF QDHPKNENQE EEPIDTLLEA KFDAATTRLP GFLTKIDQKT ILKFYGLYKQ  60
   61 AVEGPADSKK GPYWFETVAR KKFNSWLANS QMSRSRAMEA YCELMAQLDT SWDPDAETVK 120
  121 KSGLWEKMPS TMGVIEPEMF DDAVVHPPTK LETETEKKWF AAMRVSDIDT MRTLLRNEPE 180
  181 IIEAKDQYLA MTALLWATDL GCDPVVQFLI ENNVDVNAVD GCLQTALHFA AQCHRPLLAE 240
  241 LLLQAGADRS ALDADGLTPS ECCDDEDLRK KLTP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.522879
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle