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View Structure Prediction Details

Protein: tbb-6
Organism: Caenorhabditis elegans
Length: 426 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tbb-6.

Description E-value Query
Range
Subject
Range
gi|74223737 - gi|74223737|dbj|BAE28709.1| unnamed protein product [Mus musculus]
578.0 [0..1] [424..1]

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Predicted Domain #1
Region A:
Residues: [1-426]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEIINVQVG QCGNQIGAKF WEYISEEHGL QTDGTYKGDN GSQLERITSY YKEMEGRKYV  60
   61 PRAILVDLDP ESINYVRSTQ YGKLFDPENA VSGESGAGNN WSRGYYEQGA EIVDKVLSVI 120
  121 RREAEAADSL EGFQLIHSLG GGTGSGLGSL LISKLREEYS DKTLSTCSII PSAKVSDTVV 180
  181 EPYNAILSMP HLMDNCDENF CIDNEAIFDI CQYNLKLENR VTYGDLNHLA SLALSGITTF 240
  241 QRFKGNLKTD IRKLNTAGSP RLHFFMTSFA PVYGKGIIDC QAFSISDLTQ QVLDAKNIMT 300
  301 CNHNQGKFLS SAIIYRGQQT EKKDAEQIIS VENEDPSEMI ESLPKSTNTD VCDIPSRGLK 360
  361 TSATFIANST AIQEPLKRIS KQFAGLFRRK AFLHWYTMEE SEFTDAENKV NDLISEFQQY 420
  421 EKVHSA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 162.0
Match: 1ffxB
Description: Tubulin:stathmin-like domain complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle