| Protein: | twk-36 |
| Organism: | Caenorhabditis elegans |
| Length: | 562 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for twk-36.
| Description | E-value | Query Range |
Subject Range |
|
|
234.0 | [0..51] | [549..396] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MTVTSEKDGL KSILSQKYTV ERKDTVQHVL EGPGLSRNQS NASVLTLPGS RNTSSNHLPA 60
61 QRSTSVDEVA RHRVTYEMDA GKSEKSENQN PIS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [94-159] |
1 11 21 31 41 51
| | | | | |
1 QYYQKNHYTV TGNQETYQKL PRNISANRFQ VDKASISQKS APRASEPMEM PMLPQERQFD 60
61 KSFYWF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [160-562] |
1 11 21 31 41 51
| | | | | |
1 AMHRKKFGLR YIALLVLALI YTLLGATVFY LIEGSNEKSR LHVREQNLDK LLDELATVLS 60
61 EAVNDPEQSS EHQRMKEFIK ESYISLQKHE EQYKWSTYYR LEHPDNLKWT FSSAFFFSMN 120
121 VYTTTGYGSI SAQTFSGQLF TMIYAFCFVP VTLVILRDLG QMFLVNFTKL YAHGLTAVRR 180
181 IRGKREVDED EIIQLPIKFC MTILIAYLLL CTTFVYLYDA VMGPEWDDGL PYFTAFYFSF 240
241 ISLTTIGLGD VMPNNVPYAP PVSMIFFIGM AVTKVVNRAT FIAVENGVFG LMTLAETKIS 300
301 MLLTERKPGV KTVRSTSSGS SAESVDSKEP RGFDGDSDSG SDDGVINRRR NEMMNTFTVR 360
361 SIATFMRSNH DVYGGGFGRV QLRRGDLMSS NALHTVPWVR PLP
|
| Detection Method: | |
| Confidence: | 44.0 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
