| Protein: | CE36884 |
| Organism: | Caenorhabditis elegans |
| Length: | 415 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36884.
| Description | E-value | Query Range |
Subject Range |
|
|
346.0 | [0..215] | [415..1] |
|
Region A: Residues: [1-199] |
1 11 21 31 41 51
| | | | | |
1 MILHSLILVS AVSLVSSLDT TKTMTSQLHE FQMNNSAGVM SALEMLPKEC SKNGKKYQPN 60
61 EEFEIGNLRY KCQKYGVYTI EGCKRKDGTT MKLGESAVVD NVKHQCLGMG SSVFYKETTC 120
121 GVMGMPECDK VPLPKGFEAA MKKHGEKNEV PGKTNVDGVD LPKGWSLVDG GKKPITGTNA 180
181 SVVTHILMFN PTQLRAKRG
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [200-304] |
1 11 21 31 41 51
| | | | | |
1 GFKGAGVGSV IGVEMMPADQ IGKPLSSKGN SAHSSSSMSP SSSSSPSSSK IIGTQTVGAS 60
61 LQTIKSGDKH DTGLVDLNQR NDQKMSGSDK MKAGSVHGSK SNVDW
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [305-415] |
1 11 21 31 41 51
| | | | | |
1 KGRKMLNHHK AKFQFWLGLM IAQYKILSSK IEEYPETLDI RHHATMQHPL KEKNTTTLLD 60
61 QIIRKSYHDH LVPTPNFPDH NRQVAPQDEP QIDVQEGAEV AGDDHNLNGE G
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.569 | N/A | N/A | a.21.1 | HMG-box |
| View | Download | 0.498 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.464 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.428 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.418 | N/A | N/A | a.76.1 | Iron-dependent represor protein, dimerization domain |
